English
Related papers

Related papers: Substrate Specificity of Peptide Adsorption: A Mod…

200 papers

We analyze the crystallization and collapse transition of a simple model for flexible polymer chains on simple cubic and face-centered cubic lattices by means of sophisticated chain-growth methods. In contrast to bond-fluctuation polymer…

Soft Condensed Matter · Physics 2009-11-13 Thomas Vogel , Michael Bachmann , Wolfhard Janke

We consider various lattice models of polymers: lattice trees, lattice animals, and self-avoiding walks. The polymer interacts with a surface (hyperplane), receiving a unit energy reward for each site in the surface. There is an adsorption…

Mathematical Physics · Physics 2017-02-01 Neal Madras

In view of recent intense experimental and theoretical interests in the biophysics of liquid-liquid phase separation (LLPS) of intrinsically disordered proteins (IDPs), heteropolymer models with chain molecules configured as self-avoiding…

Biomolecules · Quantitative Biology 2018-08-30 Suman Das , Adam Eisen , Yi-Hsuan Lin , Hue Sun Chan

We apply the computational methodology of phase retrieval to the problem of folding heteropolymers. The ground state fold of the polymer is defined by the intersection of two sets in the configuration space of its constituent monomers: a…

Biomolecules · Quantitative Biology 2013-05-29 Veit Elser , Ivan Rankenburg

A phase diagram for a surface-interacting long flexible polymer chain in a two-dimensional poor solvent where the possibility of collapse exists is determined using exact enumeration method. A model of a self-attracting self avoiding walk…

Statistical Mechanics · Physics 2007-05-23 Yashwant Singh , Debaprasad Giri , Sanjay Kumar

The critical point of the condensation transition for linear molecules adsorbed on square lattices, was studied by using an adaptation of the Histogram Reweighting technique. The results were obtained by means of grand canonical Monte Carlo…

Statistical Mechanics · Physics 2017-03-29 G. J. dos Santos , D. H. Linares , A. J. Ramirez-Pastor

We study the phase behavior of single homopolymers in a simple hydrophobic/hydrophilic off-lattice model with sequence independent local interactions. The specific heat is, not unexpectedly, found to exhibit a pronounced peak well below the…

Soft Condensed Matter · Physics 2009-10-31 Anders Irbäck , Erik Sandelin

The adsorption of polymer and surfactant molecules onto colloidal particles or droplets in solution can be characterized non-destructively by scattering techniques. In a first part, the general framework of Dynamic Light Scattering, Small…

Soft Condensed Matter · Physics 2007-05-24 Julian Oberdisse

We present a lattice Boltzmann solution of the equations of motion describing the spreading of droplets on topologically patterned substrates. We apply it to model superhydrophobic behaviour on surfaces covered by an array of micron-scale…

Soft Condensed Matter · Physics 2007-05-23 A. Dupuis , J. M. Yeomans

A polymer chain tethered to a surface may be compact or extended, adsorbed or desorbed, depending on interactions with the surface and the surrounding solvent. This leads to a rich phase diagram with a variety of transitions. To investigate…

Soft Condensed Matter · Physics 2009-11-13 Jutta Luettmer-Strathmann , Federica Rampf , Wolfgang Paul , Kurt Binder

The density of states contains all informations on energetic quantities of a statistical system, such as the mean energy, free energy, entropy, and specific heat. As a specific application, we consider in this work a simple lattice model…

Soft Condensed Matter · Physics 2007-10-23 Michael Bachmann , Wolfhard Janke

We study the behaviour of a hydrophobic chain near a hydrophobic boundary in two dimensions, using the decorated lattice model of Berkema and Widom [G.T. Barkema and B. Widom, J. Chem. Phys. 113, 2349 (2000)] to obtain effective,…

Statistical Mechanics · Physics 2015-06-24 Pinar Onder , Ayse Erzan

We report molecular dynamics simulation results on the equilibrium properties of polymer thin films adsorbed onto flat and curved substrates. We first systematically determine the contact angle of polymer droplets on flat substrates as a…

Soft Condensed Matter · Physics 2023-12-15 Gabriel Catalini , Nicolás A. García , Daniel A. Vega , Arash Nikoubashman

We investigate a quasi-one dimensional system of trapped cold bosonic atoms in an optical lattice by using the density matrix renormalization group to study the Bose-Hubbard model at T=0 for experimentally realistic numbers of lattice…

Strongly Correlated Electrons · Physics 2007-05-23 C. Kollath , U. Schollwöck , J. von Delft , W. Zwerger

In this paper we present simulations of a surface-adsorbed polymer subject to an elongation force. The polymer is modelled by a self-avoiding walk on a regular lattice. It is confined to a half-space by an adsorbing surface with attractions…

Statistical Mechanics · Physics 2007-05-23 J. Krawczyk , T. Prellberg , A. Rechnitzer , A. L. Owczarek

We study a system of ultra-cold fermionic polar molecules in a two-dimensional square lattice interacting via both the long-ranged dipole-dipole interaction and a short-ranged on-site attractive interaction. Singlet superfluid, charge…

Quantum Gases · Physics 2015-05-27 Liang He , Walter Hofstetter

We consider self-avoiding lattice polygons, in the hypercubic lattice, as a model of a ring polymer adsorbed at a surface and either being desorbed by the action of a force, or pushed towards the surface. We show that, when there is no…

Statistical Mechanics · Physics 2018-02-14 AJ Guttmann , EJ Janse van Rensburg , I Jensen , SG Whittington

We define a lattice model for the interaction of a polymer with water. We solve the model in a suitable approximation. In the case of a non-polar homopolymer, for reasonable values of the parameters, the polymer is found in a non-compact…

Statistical Mechanics · Physics 2009-10-31 Pierpaolo Bruscolini , Lapo Casetti

Monte Carlo (MC) simulations have been carried out to study the adsorption on square and triangular lattices of particles with two bonding sites that, by decreasing temperature or increasing density, polymerize reversibly into chains with a…

Statistical Mechanics · Physics 2012-11-06 L. G. López , A. J. Ramirez-Pastor

We propose a self-consistent model taking into account variations in adsorption properties of the adsorbent surface in the process of adsorption--desorption of molecules of gas on it. We introduce a dimensionless coupling parameter that…

Materials Science · Physics 2009-11-30 A. S. Usenko