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Sequence comparison is a prerequisite to virtually all comparative genomic analyses. It is often realized by sequence alignment techniques, which are computationally expensive. This has led to increased research into alignment-free…

Data Structures and Algorithms · Computer Science 2015-12-23 Maxime Crochemore , Gabriele Fici , Robert Mercaş , Solon P. Pissis

An absent word of a word y of length n is a word that does not occur in y. It is a minimal absent word if all its proper factors occur in y. Minimal absent words have been computed in genomes of organisms from all domains of life; their…

Data Structures and Algorithms · Computer Science 2014-07-01 Carl Barton , Alice Heliou , Laurent Mouchard , Solon P. Pissis

Sequence comparison is a prerequisite to virtually all comparative genomic analyses. It is often realised by sequence alignment techniques, which are computationally expensive. This has led to increased research into alignment-free…

Data Structures and Algorithms · Computer Science 2018-06-08 Panagiotis Charalampopoulos , Maxime Crochemore , Gabriele Fici , Robert Mercas , Solon P. Pissis

Sufficient conditions for the design of a simple class of interval observers for linear impulsive systems subject to minimum and range dwell-time constraints are obtained and formulated in terms of infinite-dimensional linear programs. The…

Optimization and Control · Mathematics 2017-03-30 Corentin Briat , Mustafa Khammash

We consider the following problem: given an unsorted array of $n$ elements, and a sequence of intervals in the array, compute the median in each of the subarrays defined by the intervals. We describe a simple algorithm which uses O(n) space…

Data Structures and Algorithms · Computer Science 2009-01-14 Beat Gfeller , Peter Sanders

We introduce a temporal model for reasoning on disjunctive metric constraints on intervals and time points in temporal contexts. This temporal model is composed of a labeled temporal algebra and its reasoning algorithms. The labeled…

Artificial Intelligence · Computer Science 2011-06-01 F. Barber

Interval scheduling is a basic problem in the theory of algorithms and a classical task in combinatorial optimization. We develop a set of techniques for partitioning and grouping jobs based on their starting and ending times, that enable…

Data Structures and Algorithms · Computer Science 2023-02-27 Spencer Compton , Slobodan Mitrović , Ronitt Rubinfeld

We study the problem of optimizing Large Language Model (LLM) inference scheduling to minimize total latency. LLM inference is an online and multi-task service process and also heavily energy consuming by which a pre-trained LLM processes…

Machine Learning · Computer Science 2025-09-03 Zixi Chen , Yinyu Ye , Zijie Zhou

In the recent years several research efforts have focused on the concept of time granularity and its applications. A first stream of research investigated the mathematical models behind the notion of granularity and the algorithms to manage…

Artificial Intelligence · Computer Science 2011-10-12 C. Bettini , S. Mascetti , X. S. Wang

In online interval scheduling, the input is an online sequence of intervals, and the goal is to accept a maximum number of non-overlapping intervals. In the more general disjoint path allocation problem, the input is a sequence of requests,…

Data Structures and Algorithms · Computer Science 2025-01-24 Joan Boyar , Lene M. Favrholdt , Shahin Kamali , Kim S. Larsen

Conventional operating system scheduling algorithms are largely content-ignorant, making decisions based on factors such as latency or fairness without considering the actual intents or semantics of processes. Consequently, these algorithms…

Machine Learning · Computer Science 2025-06-17 Wenyue Hua , Dujian Ding , Yile Gu , Yujie Ren , Kai Mei , Minghua Ma , William Yang Wang

We have attempted in this paper to reduce the number of checked condition through saving frequency of the tandem replicated words, and also using non-overlapping iterative neighbor intervals on plane sweep algorithm. The essential idea of…

Data Structures and Algorithms · Computer Science 2012-11-20 Elahe Moghimi Hanjani , Mahdi Javanmard

We consider the problem of computing a sequence of range minimum queries. We assume a sequence of commands that contains values and queries. Our goal is to quickly determine the minimum value that exists between the current position and a…

Data Structures and Algorithms · Computer Science 2021-02-19 Luís M. S. Russo

Proving the linearizability of highly concurrent data structures, such as those using optimistic concurrency control, is a challenging task. The main difficulty is in reasoning about the view of the memory obtained by the threads, because…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-07 Yotam M. Y. Feldman , Constantin Enea , Adam Morrison , Noam Rinetzky , Sharon Shoham

This article considers algorithmic and statistical aspects of linear regression when the correspondence between the covariates and the responses is unknown. First, a fully polynomial-time approximation scheme is given for the natural least…

Machine Learning · Computer Science 2017-11-09 Daniel Hsu , Kevin Shi , Xiaorui Sun

In this work we present a new simple but efficient scheme - Subsquares approach - for development of algorithms for enclosing the solution set of overdetermined interval linear systems. We are going to show two algorithms based on this…

Numerical Analysis · Computer Science 2013-05-07 Jaroslav Horáček , Milan Hladík

The task of inferring logical formulas from examples has garnered significant attention as a means to assist engineers in creating formal specifications used in the design, synthesis, and verification of computing systems. Among various…

Logic in Computer Science · Computer Science 2025-06-04 Benjamin Bordais , Daniel Neider

Traditional approaches focus on finding relationships between two entire time series, however, many interesting relationships exist in small sub-intervals of time and remain feeble during other sub-intervals. We define the notion of a…

Machine Learning · Computer Science 2019-06-05 Saurabh Agrawal , Saurabh Verma , Anuj Karpatne , Stefan Liess , Snigdhansu Chatterjee , Vipin Kumar

Linearisability has become the standard correctness criterion for concurrent data structures, ensuring that every history of invocations and responses of concurrent operations has a matching sequential history. Existing proofs of…

Logic in Computer Science · Computer Science 2013-07-29 Brijesh Dongol , John Derrick

The minimum distance of a code is an important concept in information theory. Hence, computing the minimum distance of a code with a minimum computational cost is a crucial process to many problems in this area. In this paper, we present…

Information Theory · Computer Science 2024-05-01 Fernando Hernando , Francisco D. Igual , Gregorio Quintana-Ortí
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