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We present vivid, an R package for visualizing variable importance and variable interactions in machine learning models. The package provides a range of displays including heatmap and graph-based displays for viewing variable importance and…

Computation · Statistics 2024-10-15 Alan Inglis , Andrew Parnell , Catherine Hurley

The gluon field configurations that form the foundation of every lattice QCD calculation contain a rich diversity of emergent nonperturbative structure. Visualisations of these phenomena not only serve to explain the concept of a nontrivial…

We develop multiple view visualization of higher dimensional data. Our work was chiefly motivated by the need to extract insight from four dimensional Quantum Chromodynamic (QCD) data. We develop visualization where multiple views,…

Graphics · Computer Science 2007-05-23 Stanimire Tomov , Michael McGuigan

A large part of the use of knowledge base systems is the interpretation of the output by the end-users and the interaction with these users. Even during the development process visualisations can be a great help to the developer. We created…

Programming Languages · Computer Science 2015-11-04 Ruben Lapauw , Ingmar Dasseville , Marc Denecker

The virtual reality (VR) provides us a three-dimensional, immersive, and fully interactive visualization environment. To make the best use of the VR's potential in scientific visualization, a VR visualization software named VFIVE has been…

Geophysics · Physics 2007-05-23 Akira Kageyama , Nobuaki Ohno

Several visualization schemes have been developed for imaging materials at the atomic level through atom probe tomography. The main shortcoming of these tools is their inability to parallel process data using multi-core computing units to…

Materials Science · Physics 2012-02-07 Hari Dahal , Michael Stukowski , Matthias J. Graf , Alexander V. Balatsky , Krishna Rajan

Quantum chromodynamics, most commonly referred to as QCD, is a relativistic quantum field theory for the strong interaction between subatomic particles called quarks and gluons. The most systematic way of calculating the strong interactions…

High Energy Physics - Lattice · Physics 2017-06-06 Dean P. Thomas , Rita Borgo , Robert S. Laramee , Simon J. Hands

The IDIA Visualisation Laboratory based at the University of Cape Town is exploring the use of virtual reality technology to visualise and analyse astronomical data. The iDaVIE software suite currently under development reads from both…

Instrumentation and Methods for Astrophysics · Physics 2021-03-29 Alexander K. Sivitilli , Angus Comrie , Lucia Marchetti , Thomas H. Jarrett

Large-scale numerical simulations of planetary interiors require dedicated visualization algorithms that are able to efficiently extract a large amount of information in an interactive and user-friendly way. Here we present a software…

The CAVE-type virtual reality (VR) system was introduced for scientific visualization of large scale data in the plasma simulation community about a decade ago. Since then, we have been developing a VR visualization software, VFIVE, for…

Geophysics · Physics 2009-11-11 Nobuaki Ohno , Akira Kageyama , Kanya Kusano

The exponential growth of data in Astrophysics and Cosmology demands scalable computational tools and intuitive interfaces for analysis and visualization. In this work, we present an innovative integration of the VisIVO scientific…

Instrumentation and Methods for Astrophysics · Physics 2025-10-07 Eva Sciacca , Nicola Tuccari , Umer Arshad , Fabio Pitari , Giuseppa Muscianisi , Emiliano Tramontana

The ability to precisely visualize the atomic geometry of the interactions between a drug and its protein target in structural models is critical in predicting the correct modifications in previously identified inhibitors to create more…

Biomolecules · Quantitative Biology 2018-08-14 Erick Martins Ratamero , Dom Bellini , Christopher G. Dowson , Rudolf A. Roemer

In many scientific research fields, understanding and visualizing a black-box function in terms of the effects of all the input variables is of great importance. Existing visualization tools do not allow one to visualize the effects of all…

Machine Learning · Computer Science 2023-03-08 Shengtong Zhang , Daniel W. Apley

With the ongoing emergence of smart and distributed grids, it becomes increasingly important to understand as well as improve legacy infrastructure while operating a much more interconnected and fragile architecture. To support this…

Human-Computer Interaction · Computer Science 2022-04-13 Maximilian T. Fischer , Daniel A. Keim

In this article we introduce PINGSoft, a set of IDL routines designed to visualise and manipulate, in an interactive and friendly way, Integral Field Spectroscopic data. The package is optimised for large databases and a fast visualisation…

Instrumentation and Methods for Astrophysics · Physics 2015-05-19 F. F. Rosales-Ortega

The family of image visibility graphs (IVGs) have been recently introduced as simple algorithms by which scalar fields can be mapped into graphs. Here we explore the usefulness of such operator in the scenario of image processing and image…

Data Analysis, Statistics and Probability · Physics 2019-11-19 Jacopo Iacovacci , Lucas Lacasa

Computing has revolutionised the study of complex nonlinear systems, both by allowing us to solve previously intractable models and through the ability to visualise solutions in different ways. Using ubiquitous computing infrastructure, we…

Physics Education · Physics 2023-10-18 Benjamin J. Walker , Adam K. Townsend , Alexander K. Chudasama , Andrew L. Krause

This paper presents lpviz, a browser-based visualization tool for linear programming. lpviz is deeply interactive, offering an intuitive interface where users can directly draw and edit the feasible region and objective vector, without…

Human-Computer Interaction · Computer Science 2026-05-01 Evan Grand , Michael Klamkin

Effective data visualization is a key part of the discovery process in the era of big data. It is the bridge between the quantitative content of the data and human intuition, and thus an essential component of the scientific path from data…

The centre vortex structure of the $SU(3)$ gauge field vacuum is explored through the use of novel visualisation techniques. The lattice is partitioned into 3D time slices, and vortices are identified by locating plaquettes with nontrivial…

High Energy Physics - Lattice · Physics 2020-09-15 James C. Biddle , Waseem Kamleh , Derek B. Leinweber
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