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A topological constraint on the dynamics of a magnetic field in a flux tube arises from the fixed point indices of its field line mapping. This can explain unexpected behaviour in recent resistive-magnetohydrodynamic simulations of magnetic…

Plasma Physics · Physics 2015-03-19 A. R. Yeates , G. Hornig

Many cellular processes are tightly connected to the dynamics of microtubules (MTs). While in neuronal axons MTs mainly regulate intracellular trafficking, they participate in cytoskeleton reorganization in many other eukaryotic cells,…

Subcellular Processes · Quantitative Biology 2017-12-19 M. Reza Shaebani , Aravind Pasula , Albrecht Ott , Ludger Santen

We develop a scaling theory to describe dynamic fluctuations of a semiflexible polymer and find several distinct regimes. We performed simulations to characterize the longitudinal and transverse dynamics; using ensemble averaging for a…

Soft Condensed Matter · Physics 2009-10-31 R. Everaers , F. Julicher , A. Ajdari , A. C. Maggs

Coupled systems in mesoscopic regime are of interest as charge fluctuation between the sub-systems will depend on electron-electron interactions and will play a dominant role in determining their thermodynamic properties. We study some…

Mesoscale and Nanoscale Physics · Physics 2009-09-29 P. Singha Deo , P. Koskinen , M. Manninen

We study the structure and dynamics of the interface separating a passive fluid from a microtubule-based active fluid. Turbulent-like active flows power giant interfacial fluctuations, which exhibit pronounced asymmetry between regions of…

Utilising Onsager's variational formulation, we derive dynamical equations for the relaxation of a fluid membrane tube in the limit of small deformation, allowing for a contrast of solvent viscosity across the membrane and variations in…

Soft Condensed Matter · Physics 2022-08-30 Sami C. Al-Izzi , Pierre Sens , Matthew S. Turner , Shigeyuki Komura

Diffusivity in some soft matter and biological systems changes with time, called the fluctuating diffusivity. In this work, we propose a novel origin for fluctuating diffusivity based on stochastic simulations of binary gas mixtures. In…

Statistical Mechanics · Physics 2023-02-01 Fumiaki Nakai , Yuichi Masubuchi , Yuya Doi , Takato Ishida , Takashi Uneyama

We report on an experimental investigation of the tumbling of microrods in the shear flow of a microchannel (40 x 2.5 x 0.4 mm). The rods are 20 to 30 microns long and their diameters are of the order of 1 micron. Images of the…

Fluid Dynamics · Physics 2013-10-30 J. Einarsson , A. Johansson , S. K. Mahato , Y. Mishra , J. R. Angilella , D. Hanstorp , B. Mehlig

Unentangled wormlike micelle solutions relax stress through a dynamic interplay of reversible scission and intrachain relaxation involving a hierarchy of molecular timescales whose relationship to linear viscoelastic response remains…

Soft Condensed Matter · Physics 2026-04-24 Avishek Kumar , Rico F Tabor , P. Sunthar , J. Ravi Prakash

The fracture of carbon nanotubes is studied by atomistic simulations. The fracture behavior is found to be almost independent of the separation energy and to depend primarily on the inflection point in the interatomic potential. The rangle…

Atomic and Molecular Clusters · Physics 2009-11-07 T. Belytschko , S. P. Xiao , G. C. Schatz , R. Ruoff

We investigate hydrodynamic fluctuations in a 2D granular fluid excited by a vibrating base and in the presence of gravity, focusing on the transverse velocity modes. Since the system is inhomogeneous, we measure fluctuations in horizontal…

Soft Condensed Matter · Physics 2015-05-28 Giulio Costantini , Andrea Puglisi

We present a model for the spontaneous formation of a striated pattern in polymerizing microtubule solutions. It describes the buckling of a single microtubule (MT) bundle within an elastic network formed by other similarly aligned and…

Biological Physics · Physics 2007-06-13 Yongxing Guo , Yifeng Liu , Jay X. Tang , James M. Valles

Certain regulatory proteins influence the polymerization dynamics of microtubules by inducing catastrophe with a rate that depends on the microtubule length. Using a discrete formulation, here we show that, for a catastrophe rate…

Biological Physics · Physics 2012-08-27 Vandana Yadav , Sutapa Mukherji

Two-dimensional crystalline membranes have recently been realized experimentally in such systems as graphene and molybdenum disulfide, sparking a resurgence in interest in their statistical properties. Thermal fluctuations can significantly…

Soft Condensed Matter · Physics 2017-07-19 Emily Russell , Rastko Sknepnek , Mark J. Bowick

Microphase separation of membrane components is thought to play an important role in many physiological processes, from cell signaling to endocytosis and cellular trafficking. Here, we study how variations in the membrane composition can be…

Subcellular Processes · Quantitative Biology 2015-05-20 Pierre Sens , Matthew S. Turner

Soft solids with tunable mechanical response are at the core of new material technologies, but a crucial limit for applications is their progressive aging over time, which dramatically affects their functionalities. The generally accepted…

Soft Condensed Matter · Physics 2017-08-02 Mehdi Bouzid , Jader Colombo , Lucas Vieira Barbosa , Emanuela Del Gado

It is known that obstacles can hydrodynamically trap bacteria and synthetic microswimmers in orbits, where the trapping time heavily depends on the swimmer flow field and noise is needed to escape the trap. Here, we use experiments and…

We investigate numerically the relaxation dynamics of an elastic string in two-dimensional random media by thermal fluctuations starting from a flat configuration. Measuring spatial fluctuations of its mean position, we find that the…

Statistical Mechanics · Physics 2015-05-14 Jae Dong Noh , Hyunggyu Park

The dynamic interaction of complex fluid interfaces is highly sensitive to near-contact interactions occurring at the scale of ten of nanometers. Such interactions are difficult to analyse because they couple self-consistently to the…

Soft Condensed Matter · Physics 2020-05-14 A. Tiribocchi , A. Montessori , S. Miliani , M. Lauricella , M. La Rocca , S. Succi

Minimal models of self-propelled particles with short-range volume exclusion interactions have been shown to exhibit signatures of phase separation. Here I show that the observed interfacial stability and fluctuations in motility-induced…

Soft Condensed Matter · Physics 2017-01-11 Chiu Fan Lee
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