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Understanding the mechanisms of interactions within cells, tissues, and organisms is crucial to driving developments across biology and medicine. Mathematical modeling is an essential tool for simulating biological systems and revealing…

Molecular Networks · Quantitative Biology 2024-08-13 Lingxia Qiao , Ali Khalilimeybodi , Nathaniel J Linden-Santangeli , Padmini Rangamani

A century ago physicists and mathematicians worked in tandem and established quantum mechanism. Indeed, algebras, partial differential equations, group theory, and functional analysis underpin the foundation of quantum mechanism. Currently,…

Other Quantitative Biology · Quantitative Biology 2017-11-07 Guo-Wei Wei

I give a highly selective overview of the way statistical mechanics explains the microscopic origins of the time asymmetric evolution of macroscopic systems towards equilibrium and of first order phase transitions in equilibrium. These…

Mathematical Physics · Physics 2009-10-31 Joel L. Lebowitz

Statistical boosting algorithms have triggered a lot of research during the last decade. They combine a powerful machine-learning approach with classical statistical modelling, offering various practical advantages like automated variable…

This essay provides a critical overview of the mathematical kinetic theory of active particles, which is used to model and study collective systems consisting of interacting living entities, such as those involved in behavior and evolution.…

Physics and Society · Physics 2025-10-17 Marina Dolfin , Leone Leonida

The statistical models used to derive the results of experimental analyses are of incredible scientific value and are essential information for analysis preservation and reuse. In this paper, we make the scientific case for systematically…

There is no compelling reason imposing that the methods of statistical mechanics should be restricted to the dynamical systems which follow the usual Boltzmann-Gibbs prescriptions. More specifically, ubiquitous natural and artificial…

Statistical Mechanics · Physics 2009-11-10 Constantino Tsallis

Statistical physics has proven to be a very fruitful framework to describe phenomena outside the realm of traditional physics. The last years have witnessed the attempt by physicists to study collective phenomena emerging from the…

Physics and Society · Physics 2009-05-11 Claudio Castellano , Santo Fortunato , Vittorio Loreto

Data science has arrived, and computational statistics is its engine. As the scale and complexity of scientific and industrial data grow, the discipline of computational statistics assumes an increasingly central role among the statistical…

Other Statistics · Statistics 2022-04-13 Andrew J. Holbrook , Akihiko Nishimura , Xiang Ji , Marc A. Suchard

In an increasingly data-driven world, facility with statistics is more important than ever for our students. At institutions without a statistician, it often falls to the mathematics faculty to teach statistics courses. This paper presents…

Other Statistics · Statistics 2021-09-01 David White

Nowadays it is inevitable to use intelligent systems to improve the performance and optimization of different components of devices or factories. Furthermore, it's so essential to have appropriate predictions to make better decisions in…

Artificial Intelligence · Computer Science 2021-01-01 Ashkan Yousefi Zadeh , Meysam Shahbazy

The physiological tradition of biological research analyzes biological systems using reduced descriptions much as an engineer uses a 'black box' description of an amplifier. Simple models have been used by physiologists for a very long…

Other Quantitative Biology · Quantitative Biology 2012-07-06 Bob Eisenberg

The paper discusses fundamental problems in mathematical description of social systems based on physical concepts, with so-called statistical social systems being the main subject of consideration. Basic properties of human beings and human…

Physics and Society · Physics 2011-04-11 Ihor Lubashevsky , Natalia Plawinska

Statistical science (as opposed to mathematical statistics) involves far more than probability theory, for it requires realistic causal models of data generators - even for purely descriptive goals. Statistical decision theory requires more…

Other Statistics · Statistics 2022-06-02 Sander Greenland

This paper explores the connection between dynamical system properties and statistical physics of ensembles of such systems. Simple models are used to give novel phase transitions; particularly for finite N particle systems with many…

Statistical Mechanics · Physics 2007-11-06 Ajay Patwardhan

Modeling and simulation are recognized as important aspects of the scientific method for more than 70 years but its adoption in biology has been slow. Debates on its representativeness, usefulness, and whether the effort spent on such…

Quantitative Methods · Quantitative Biology 2023-02-21 Maurice HT Ling

Data Science is a multidisciplinary field that plays a crucial role in extracting valuable insights and knowledge from large and intricate datasets. Within the realm of Data Science, two fundamental components are Information Theory (IT)…

Data Analysis, Statistics and Probability · Physics 2024-12-31 Shahid Nawaz , Muhammad Saleem , F. V. Kusmartsev , Dalaver H. Anjum

It is shown that the statistical conception of quantum mechanics is dynamical but not probabilistic, i.e. the statistical description in quantum mechanics is founded on dynamics. A use of the probability theory, when it takes place, is…

Quantum Physics · Physics 2007-05-23 Yuri A. Rylov

We advocate the use of qualitative models in the analysis of large biological systems. We show how qualitative models are linked to theoretical differential models and practical graphical models of biological networks. A new technique for…

Molecular Networks · Quantitative Biology 2007-05-23 Philippe Veber , Michel Le_Borgne , Anne Siegel , Sandrine Lagarrigue , Ovidiu Radulescu

As the twin movements of open science and open source bring an ever greater share of the scientific process into the digital realm, new opportunities arise for the meta-scientific study of science itself, including of data science and…

Statistics Theory · Mathematics 2020-06-17 Evan Patterson