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We study the nonlinear response to an external force of an inertial tracer advected by a two-dimensional incompressible laminar flow and subject to thermal noise. In addition to the driving external field $F$, the main parameters in the…

Statistical Mechanics · Physics 2017-09-25 F. Cecconi , A. Puglisi , A. Sarracino , A. Vulpiani

A ratchet model for coupled Brownian motors, inspired by the motion of individual two-headed molecular motors on cytoskeletal filaments, is proposed. Such motors are modeled as two elastically coupled Brownian particles, each of which moves…

Soft Condensed Matter · Physics 2009-11-07 Debasis Dan , A. M. Jayannavar , Gautam I. Menon

We study the driven Brownian motion of hard rods in a one-dimensional cosine potential with an amplitude large compared to the thermal energy. In a closed system, we find surprising features of the steady-state current in dependence of the…

Statistical Mechanics · Physics 2018-10-24 Dominik Lips , Artem Ryabov , Philipp Maass

A model system inspired by recent experiments on the dynamics of a folded protein under the influence of a sinusoidal force is investigated and found to replicate many of the response characteristics of such a system. The essence of the…

Soft Condensed Matter · Physics 2015-09-30 Craig Fogle , Joseph Rudnick , David Jasnow

The equilibrium structure of a Dinucleosome is studied using an elastic model that takes into account the force and torque balance conditions. Using the proper boundary conditions, it is found that the conformational energy of the problem…

Biological Physics · Physics 2016-07-12 Hashem Fatemi , Fatemeh Khodabandeh , Farshid Mohammad-Rafiee

We study controllable friction in a system consisting of a dark soliton in a one-dimensional Bose-Einstein condensate coupled to a non-interacting Fermi gas. The fermions act as impurity atoms, not part of the original condensate, that…

Quantum Gases · Physics 2017-05-08 Hilary M. Hurst , Dmitry K. Efimkin , I. B. Spielman , Victor Galitski

When swimming at low Reynolds numbers, inertial effects are negligible and reciprocal movements cannot induce net motion. Instead, symmetry breaking is necessary to achieve net propulsion. Directed swimming can be supported by magnetic…

Soft Condensed Matter · Physics 2026-03-31 Theo Lequy , Andreas M. Menzel

Using Brownian dynamics (BD) simulations and an analytical approach we investigate the shear-induced, nonequilibrium dynamics of dense colloidal suspensions confined to a narrow slit-pore. Focusing on situations where the colloids arrange…

Soft Condensed Matter · Physics 2017-01-04 Sascha Gerloff , Sabine H. L. Klapp

Saving energy and enhancing performance are secular preoccupations shared by both nature and human beings. In animal locomotion, flapping flyers or swimmers rely on the flexibility of their wings or body to passively increase their…

Biological Physics · Physics 2011-08-30 Sophie Ramananarivo , Ramiro Godoy-Diana , Benjamin Thiria

The non-thermal nature of self-propelling colloids offers new insights into non-equilibrium physics. The central mathematical model to describe their trajectories is active Brownian motion, where a particle moves with a constant speed,…

Wearless friction is investigated in a simple mechanical model called Frenkel-Kontorova-Tomlinson model. We have introduced this model in [Phys. Rev. B, Vol. 53, 7539 (1996)] where the static friction has already been considered. Here the…

Statistical Mechanics · Physics 2009-10-30 Michael Weiss , Franz-Josef Elmer

We investigate the translational motion of rotating colloidal systems at moderate Reynolds numbers (Re), focusing on particle dimers in snowman-like configurations under three scenarios: (i) two co-rotating spheres driven by an external…

Soft Condensed Matter · Physics 2025-06-04 Zaiyi Shen , Dongfang Fu , Juho Lintuvuori

Contractility in animal cells is often generated by molecular motors such as myosin, which require polar substrates for their function. Motivated by recent experimental evidence of motor-independent contractility, we propose a robust…

Soft Condensed Matter · Physics 2022-05-04 Sihan Chen , Tomer Markovich , Fred C. MacKintosh

We study the compression and extension dynamics of a DNA-like polymer interacting with non-DNA binding and DNA-binding proteins, by means of computer simulations. The geometry we consider is inspired by recent experiments probing the…

Soft Condensed Matter · Physics 2017-09-13 M. C. F. Pereira , C. A. Brackley , J. S. Lintuvuori , D. Marenduzzo , E. Orlandini

The self-propulsion of artificial and biological microswimmers (i.e., active colloidal particles) has often been modelled by using a force and a torque entering into the overdamped equations for the Brownian motion of passive particles.…

Soft Condensed Matter · Physics 2015-07-10 Borge ten Hagen , Raphael Wittkowski , Daisuke Takagi , Felix Kümmel , Clemens Bechinger , Hartmut Löwen

Experimental realizations of self-propelled colloidal Janus particles exploit the conversion of free energy into directed motion. One route are phoretic mechanisms that can be modeled schematically as the interconversion of two chemical…

Statistical Mechanics · Physics 2019-09-04 Thomas Speck

Oscillations of flagella and cilia play an important role in biology, which motivates the idea of functional mimicry as part of bio-inspired applications. Nevertheless, it still remains challenging to drive their artificial counterparts to…

Soft Condensed Matter · Physics 2019-06-10 Lailai Zhu , Howard A. Stone

We consider two complementary polymer strands of length $L$ attached by a common end monomer. The two strands bind through complementary monomers and at low temperatures form a double stranded conformation (zipping), while at high…

Statistical Mechanics · Physics 2015-03-19 Jean-Charles Walter , Alessandro Ferrantini , Enrico Carlon , Carlo Vanderzande

Micron-sized self-propelled (active) particles can be considered as model systems for characterizing more complex biological organisms like swimming bacteria or motile cells. We produce asymmetric microswimmers by soft lithography and study…

We present a Brownian dynamics model of driven polymer translocation, in which non-equilibrium memory effects arising from tension propagation (TP) along the cis side subchain are incorporated as a time-dependent friction. To solve the…

Soft Condensed Matter · Physics 2015-06-03 Timo Ikonen , Aniket Bhattacharya , Tapio Ala-Nissila , Wokyung Sung