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Assessing whether a given network is typical or atypical for a random-network ensemble (i.e., network-ensemble comparison) has widespread applications ranging from null-model selection and hypothesis testing to clustering and classifying…

Physics and Society · Physics 2017-12-01 Zichao Li , Peter J. Mucha , Dane Taylor

In statistical mechanical investigations on complex networks, it is useful to employ random graphs ensembles as null models, to compare with experimental realizations. Motivated by transcription networks, we present here a simple way to…

Statistical Mechanics · Physics 2009-11-11 F. Bassetti , M. Cosentino Lagomarsino , B. Bassetti , P. Jona

In this paper, a random clique network model to mimic the large clustering coefficient and the modular structure that exist in many real complex networks, such as social networks, artificial networks, and protein interaction networks, is…

Physics and Society · Physics 2017-05-05 Yi-Min Ding , Jun Meng , Jing-Fang Fan , Fang-Fu Ye , Xiao-Song Chen

In random graph models, the degree distribution of an individual node should be distinguished from the (empirical) degree distribution of the graph that records the fractions of nodes with given degree. We introduce a general framework to…

Social and Information Networks · Computer Science 2018-11-14 Siddharth Pal , Armand M. Makowski

Network architecture design is very important for the optimization of industrial networks. The type of network architecture can be divided into small-scale network and large-scale network according to its scale. Graph theory is an efficient…

Social and Information Networks · Computer Science 2022-09-20 Chao Dong , Xiaoxiong Xiong , Qiulin Xue , Zhengzhen Zhang , Kai Niu , Ping Zhang

New entropy measures have been recently introduced for the quantification of the complexity of networks. Most of these entropy measures apply to static networks or to dynamical processes defined on static complex networks. In this paper we…

Disordered Systems and Neural Networks · Physics 2015-05-30 Kun Zhao , Arda Halu , Simone Severini , Ginestra Bianconi

We derive the finite size dependence of the clustering coefficient of scale-free random graphs generated by the configuration model with degree distribution exponent $2<\gamma<3$. Degree heterogeneity increases the presence of triangles in…

Disordered Systems and Neural Networks · Physics 2015-06-05 Pol Colomer-de-Simon , Marian Boguna

Stochastic blockmodels are generative network models where the vertices are separated into discrete groups, and the probability of an edge existing between two vertices is determined solely by their group membership. In this paper, we…

Statistical Mechanics · Physics 2013-11-12 Tiago P. Peixoto

Using a maximum entropy principle to assign a statistical weight to any graph, we introduce a model of random graphs with arbitrary degree distribution in the framework of standard statistical mechanics. We compute the free energy and the…

Disordered Systems and Neural Networks · Physics 2007-05-23 M. Bauer , D. Bernard

We present a method for the construction of ensembles of random networks that consist of a single connected component with a given degree distribution. This approach extends the construction toolbox of random networks beyond the…

Disordered Systems and Neural Networks · Physics 2019-04-19 Ido Tishby , Ofer Biham , Eytan Katzav , Reimer Kühn

Nowadays there is a multitude of measures designed to capture different aspects of network structure. To be able to say if the structure of certain network is expected or not, one needs a reference model (null model). One frequently used…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Petter Holme , Jing Zhao

In this paper we describe the emergence of scale-free degree distributions from statistical mechanics principles. We define an energy associated to a degree sequence as the logarithm of the number of indistinguishable simple networks it is…

Statistical Mechanics · Physics 2007-05-23 Ginestra Bianconi

One of the main characteristics of real-world networks is their large clustering. Clustering is one aspect of a more general but much less studied structural organization of networks, i.e. edge multiplicity, defined as the number of…

Physics and Society · Physics 2012-01-31 Vinko Zlatic , Diego Garlaschelli , Guido Caldarelli

Using each node's degree as a proxy for its importance, the topological hierarchy of a complex network is introduced and quantified. We propose a simple dynamical process used to construct networks which are either maximally or minimally…

Soft Condensed Matter · Physics 2008-06-24 Ala Trusina , Sergei Maslov , Petter Minnhagen , Kim Sneppen

This article discusses the properties of extremes of degree sequences calculated from network data. We introduce the notion of a normalized degree, in order to permit a comparison of degree sequences between networks with differing numbers…

Methodology · Statistics 2012-10-17 Sofia C. Olhede , Patrick J. Wolfe

Maximum entropy null models of networks come in different flavors that depend on the type of constraints under which entropy is maximized. If the constraints are on degree sequences or distributions, we are dealing with configuration…

Physics and Society · Physics 2020-10-30 Ivan Voitalov , Pim van der Hoorn , Maksim Kitsak , Fragkiskos Papadopoulos , Dmitri Krioukov

The field of complex networks studies a wide variety of interacting systems by representing them as networks. To understand their properties and mutual relations, the randomisation of network connections is a commonly used tool. However,…

Statistical Mechanics · Physics 2024-10-18 Noam Abadi , Franco Ruzzenenti

We define a statistical ensemble of non-degenerate graphs, i.e. graphs without multiple- and self-connections between nodes. The node degree distribution is arbitrary, but the nodes are assumed to be uncorrelated. This completes our earlier…

Statistical Mechanics · Physics 2009-11-07 Z. Burda , A. Krzywicki

Various important and useful quantities or measures that characterize the topological network structure are usually investigated for a network, then they are averaged over the samples. In this paper, we propose an explicit representation by…

Physics and Society · Physics 2016-09-02 Yukio Hayashi

Many real networks feature the property of nestedness, i.e. the neighbours of nodes with a few connections are hierarchically nested within the neighbours of nodes with more connections. Despite the abstract simplicity of this notion,…

Physics and Society · Physics 2020-12-08 Matteo Bruno , Fabio Saracco , Diego Garlaschelli , Claudio J. Tessone , Guido Caldarelli