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Demographic noise has profound effects on evolutionary and population dynamics, as well as on chemical reaction systems and models of epidemiology. Such noise is intrinsic and due to the discreteness of the dynamics in finite populations.…

Physics and Society · Physics 2015-05-14 Tobias Galla

Noise is usually regarded as adversarial to extract the effective dynamics from time series, such that the conventional data-driven approaches usually aim at learning the dynamics by mitigating the noisy effect. However, noise can have a…

Adaptation and Self-Organizing Systems · Physics 2023-09-12 Zequn Lin , Zhaofan Lu , Zengru Di , Ying Tang

Field theory tools are applied to analytically study fluctuation and correlation effects in spatially extended stochastic predator-prey systems. In the mean-field rate equation approximation, the classic Lotka-Volterra model is…

Statistical Mechanics · Physics 2012-09-21 Uwe C. Tauber

The influence of an external random field on the competition process in a nonlinear open spatially extended system is analyzed numerically. A three-component model is chosen as the competition model in which a "weak" species can move in…

Pattern Formation and Solitons · Physics 2015-12-02 S. E. Kurushina , V. V. Maximov , E. A. Shapovalova , Yu. M. Romanovskii , I. P. Zavershinskii , D. S. Garipov

We explore the complex dynamical behavior of simple predator-prey models of biological coevolution that account for interspecific and intraspecific competition for resources, as well as adaptive foraging behavior. In long kinetic Monte…

Populations and Evolution · Quantitative Biology 2009-10-26 Per Arne Rikvold

There have been many studies to examine whether one trait is correlated with another trait across a group of present-day species (for example, do species with larger brains tend to have longer gestation times. Since the introduction of the…

Populations and Evolution · Quantitative Biology 2023-09-07 Albert Ch. Soewongsono , Barbara R. Holland , Malgorzata M. O'Reilly

Results are reported concerning the formation of spatial patterns in the two-species ratio-dependent predator-prey model driven by spatial colored-noise. The results show that there is a critical value with respect to the intensity of…

Populations and Evolution · Quantitative Biology 2009-11-13 Quan-Xing Liu , Zhen Jin

Understanding the cause of the synchronization of population evolution is an important issue for ecological improvement. Here we present a Lotka-Volterra-type model driven by two correlated environmental noises and show, via theoretical…

Other Quantitative Biology · Quantitative Biology 2007-05-23 Wei-Rong Zhong , Yuan-Zhi Shao , Zhen-Hui He , Meng-Jie Bie , Dan Huang

Although stochastic optimization is central to modern machine learning, the precise mechanisms underlying its success, and in particular, the precise role of the stochasticity, still remain unclear. Modelling stochastic optimization…

Machine Learning · Statistics 2020-06-12 Liam Hodgkinson , Michael W. Mahoney

In order to better understand the impact of environmental stochastic fluctuations on the evolution of animal behavior, we introduce the concept of a stochastic Nash equilibrium (SNE) that extends the classical concept of a Nash equilibrium…

Populations and Evolution · Quantitative Biology 2023-10-26 Cong Li , Tianjiao Feng , Xiudeng Zheng , Sabin Lessard , Yi Tao

The dynamics of a spatially extended system of two competing species in the presence of two noise sources is studied. A correlated dichotomous noise acts on the interaction parameter and a multiplicative white noise affects directly the…

Statistical Mechanics · Physics 2009-11-11 D. Valenti , L. Schimansky-Geier , X. Sailer , B. Spagnolo

We study the limiting dynamics of a large class of noisy gradient descent systems in the overparameterized regime. In this regime the set of global minimizers of the loss is large, and when initialized in a neighbourhood of this zero-loss…

Machine Learning · Computer Science 2024-04-19 Anna Shalova , André Schlichting , Mark Peletier

Biological systems operate under persistent noise, which can alter system states and induce transitions between attractors. Here, we study the attractor dynamics of Boolean networks focusing on the transitions between attractors induced by…

Molecular Networks · Quantitative Biology 2026-03-05 Byungjoon Min , Jeehye Choi , Reinhard Laubenbacher

We study a six-species Lotka-Volterra type system on different two-dimensional lattices when each species has two superior and two inferior partners. The invasion rates from predator sites to a randomly chosen neighboring prey's site depend…

Statistical Mechanics · Physics 2015-11-26 Matjaz Perc , Attila Szolnoki , Gyorgy Szabo

We study a variant of the cyclic Lotka-Volterra model with three-agent interactions. Inspired by a multiplayer variation of the Rock-Paper-Scissors game, the model describes an ideal ecosystem in which cyclic competition among three species…

Populations and Evolution · Quantitative Biology 2020-10-09 Filippo Palombi , Stefano Ferriani , Simona Toti

Frequency-dependent selection reflects the interaction between different species as they battle for limited resources in their environment. In a stochastic evolutionary game the species relative fitnesses guides the evolutionary dynamics…

Probability · Mathematics 2020-12-29 Lea Popovic , Liam Peuckert

We explore the complex dynamical behavior of two simple predator-prey models of biological coevolution that on the ecological level account for interspecific and intraspecific competition, as well as adaptive foraging behavior. The…

Populations and Evolution · Quantitative Biology 2009-11-28 Per Arne Rikvold

We analyze the influence of classical Gaussian noise on Landau-Zener transitions during a two-level crossing in a time-dependent regular external field. Transition probabilities and coherence factors become random due to the noise. We…

Statistical Mechanics · Physics 2009-11-10 V. L. Pokrovsky , S. Scheidl

We analyze the spatio-temporal patterns of two competing species in the presence of two white noise sources: an additive noise acting on the interaction parameter and a multiplicative noise which affects directly the dynamics of the species…

Statistical Mechanics · Physics 2007-05-23 D. Valenti , A. Fiasconaro , B. Spagnolo

We study an individual-based predator-prey model of biological coevolution, using linear stability analysis and large-scale kinetic Monte Carlo simulations. The model exhibits approximate 1/f noise in diversity and population-size…

Populations and Evolution · Quantitative Biology 2007-06-13 Per Arne Rikvold , Volkan Sevim
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