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Related papers: Hopping Conduction and Bacteria: Transport in Diso…

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The transition from localized to systemic spreading of bacteria, viruses and other agents is a fundamental problem that spans medicine, ecology, biology and agriculture science. We have conducted experiments and simulations in a simple…

Populations and Evolution · Quantitative Biology 2009-11-10 Anna L. Lin , Bernward A. Mann , Gelsy Torres-Oviedo , Bryan Lincoln , Josef Kas , Harry L. Swinney

We investigate phase coexistence in a weakly stochastic reaction-diffusion system without assuming a continuum description. Concretely, for $(2N+1)$ diffusion-coupled vessels in which a chemical reaction exhibiting bistability occurs, we…

Statistical Mechanics · Physics 2025-01-14 Yusuke Yanagisawa , Shin-ichi Sasa

We present a multiscale approach to model diffusion in a crowded environment and its effect on the reaction rates. Diffusion in biological systems is often modeled by a discrete space jump process in order to capture the inherent noise of…

Subcellular Processes · Quantitative Biology 2016-03-18 Lina Meinecke

We study the random walk of a particle in a compartmentalized environment, as realized in biological samples or solid state compounds. Each compartment is characterized by its length $L$ and the boundaries transmittance $T$. We identify two…

Statistical Mechanics · Physics 2019-03-12 Gorka Muñoz-Gil , Miguel Angel García-March , Carlo Manzo , Alessio Celi , Maciej Lewenstein

The combination of strong disorder and many-body interactions in Anderson insulators lead to a variety of intriguing non-equilibrium transport phenomena. These include slow relaxation and a variety of memory effects characteristic of…

Disordered Systems and Neural Networks · Physics 2009-11-11 V. Orlyanchik , Z. Ovadyahu

Diffusive transport is a universal phenomenon, throughout both biological and physical sciences, and models of diffusion are routinely used to interrogate diffusion-driven processes. However, most models neglect to take into account the…

Quantitative Methods · Quantitative Biology 2015-10-28 Paul R. Taylor , Christian A. Yates , Matthew J. Simpson , Ruth E. Baker

We study reaction-diffusion systems where diffusion is by jumps whose sizes are distributed exponentially. We first study the Fisher-like problem of propagation of a front into an unstable state, as typified by the A+B $\to$ 2A reaction. We…

Statistical Mechanics · Physics 2009-11-11 Elisheva Cohen , David A. Kessler

This paper concerns a general class of PDE-ODE reaction-diffusion systems, which features a singular fast-reaction limit towards a reaction-diffusion equation coupled to a scalar hysteresis operator. As prototypical application, we present…

Analysis of PDEs · Mathematics 2018-07-05 Klemens Fellner , Christian Münch

Motivated by experiments on sheared suspensions that show a transition between ordered and disordered phases, we here study the long-time behavior of a sheared and overdamped 2-d system of particles interacting by repulsive forces. As a…

Soft Condensed Matter · Physics 2016-01-06 Jens C. Pfeifer , Tobias Bischoff , Georg Ehlers , Bruno Eckhardt

The TASEP is a paradigmatic model from non-equilibrium statistical physics, which describes particles hopping along a lattice of discrete sites. The TASEP is applicable to a broad range of different transport systems, but does not consider…

Statistical Mechanics · Physics 2012-03-20 Chris A. Brackley , Luca Ciandrini , M. Carmen Romano

We study a model for microscopic segregation in a homogeneous system of particles moving on a one-dimensional lattice. Particles tend to separate from each other, and evolution ceases when at least one empty site is found between any two…

Adaptation and Self-Organizing Systems · Physics 2009-11-11 Santiago Gil , Damian H. Zanette

Transport across heterogeneous, patchy environments is a ubiquitous phenomenon spanning fields of study including ecological movement, intracellular transport and regions of specialised function in a cell. These regions or patches may be…

Statistical Mechanics · Physics 2017-10-06 Sergei Fedotov , Helena Stage

Reaction-diffusion systems where transition rates exhibit quenched disorder are common in physical and chemical systems. We study pair reactions on a periodic two-dimensional lattice, including continuous deposition and spontaneous…

Disordered Systems and Neural Networks · Physics 2010-11-10 A. Wolff , I. Lohmar , J. Krug , Y. Frank , O. Biham

We address two-level systems arranged in ring configurations affected by static disorder. In particular we investigate the role of dephasing in the transport of an excitation along the ring. We compare the efficiency of the transfer process…

Quantum Physics · Physics 2018-01-09 Dario Tamascelli , Alessia Segati , Stefano Olivares

It is shown that for the hopping regime, the thermopowers in both finite two-terminal and three-terminal systems are governed by the edges of the samples. This is due to the fact that the energy transfer between a transport electron and a…

Mesoscale and Nanoscale Physics · Physics 2013-05-22 J. -H. Jiang , O. Entin-Wohlman , Y. Imry

We study the homogenization of a diffusion process which takes place in a binary structure formed by an ambiental connected phase surrounding a suspension of very small spheres distributed in an $\veps$-periodic network. The asymptotic…

Analysis of PDEs · Mathematics 2007-05-23 Fadila Bentalha , Isabelle Gruais , Dan Polisevski

Excitonic transport in static disordered one dimensional systems is studied in the presence of thermal fluctuations that are described by the Haken-Strobl-Reineker model. For short times, non-diffusive behavior is observed that can be…

Mesoscale and Nanoscale Physics · Physics 2015-05-05 Jeremy M. Moix , Michael Khasin , Jianshu Cao

We study the high temperature transport behavior of the Aubry-Andr\'e-Harper (AAH) model, both in the isolated thermodynamic limit and in the open system. At the critical point of the AAH model, we find hints of super-diffusive behavior…

Mesoscale and Nanoscale Physics · Physics 2018-05-30 Archak Purkayastha , Sambuddha Sanyal , Abhishek Dhar , Manas Kulkarni

In this work we study analytically and numerically the transport properties of non-interacting active particles moving on a $d$-dimensional disordered media. The disorder in the space is modeled by means of a set of non-overlapping…

Statistical Mechanics · Physics 2022-07-20 R. Salgado-García

One-dimensional non-equilibrium models of particles subjected to a coagulation-diffusion process are important in understanding non-equilibrium dynamics, and fluctuation-dissipation relation. We consider in this paper transport properties…

Statistical Mechanics · Physics 2015-06-18 Jean-Yves Fortin