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Coherent storage of quantum information is crucial to many quantum technologies. Long coherence times have been demonstrated in trapped-ion qubits, typically using the hyperfine levels within the ground state of a single ion. However,…

While information processing in complex systems can be described in abstract, general terms, there are cases in which the relation between these computations and the physical substrate of the underlying system is itself of interest.…

Neurons and Cognition · Quantitative Biology 2017-08-16 Pedro A. M. Mediano , Murray Shanahan

What is the physiological basis of long-term memory? The prevailing view in neuroscience attributes changes in synaptic efficacy to memory acquisition. This view implies that stable memories correspond to stable connectivity patterns.…

Neurons and Cognition · Quantitative Biology 2019-10-09 Lee Susman , Naama Brenner , Omri Barak

Optical phase-modulated fringe-patterns are usually digitized with XxY pixels and 8 bits/pixel (or higher) gray-levels. The digitized 8 bits/pixel are raw-data bits, not Shannon information bits. Here we show that noisy fringe-patterns…

Signal Processing · Electrical Eng. & Systems 2017-11-10 Manuel Servin , Moises Padilla

Biological synapses store multiple memories on top of each other in a palimpsest fashion and at different timescales. Palimpsest consolidation is facilitated by the interaction of hidden biochemical processes that govern synaptic efficacy…

Neurons and Cognition · Quantitative Biology 2021-09-28 Christos Giotis , Alexander Serb , Vasileios Manouras , Spyros Stathopoulos , Themis Prodromakis

DNA-based storage is an emerging technology that enables digital information to be archived in DNA molecules. This method enjoys major advantages over magnetic and optical storage solutions such as exceptional information density, enhanced…

Information Theory · Computer Science 2024-03-13 Daniella Bar-Lev , Itai Orr , Omer Sabary , Tuvi Etzion , Eitan Yaakobi

Cells use biochemical networks to translate environmental information into intracellular responses. These responses can be highly dynamic, but how the information is encoded in these dynamics remains poorly understood. Here we investigate…

Cell Behavior · Quantitative Biology 2017-04-05 Garrett D. Potter , Tommy A. Byrd , Andrew Mugler , Bo Sun

DNA data storage offers a high-density, long-term alternative to traditional storage systems, addressing the exponential growth of digital data. Composite DNA extends this paradigm by leveraging mixtures of nucleotides to increase storage…

Information Theory · Computer Science 2026-02-13 Busra Tegin , Tolga M Duman

To store information at extremely high-density and data-rate, we propose to adapt, integrate, and extend the techniques developed by chemists and molecular biologists for the purpose of manipulating biological and other macromolecules. In…

Emerging Technologies · Computer Science 2017-08-29 M. Mansuripur , P. K. Khulbe , S. M. Kuebler , J. W. Perry , M. S. Giridhar , J. Kevin Erwin , Kibyung Seong , Seth Marder , N. Peyghambarian

Multisite protein modification is a ubiquitous mechanism utilized by cells to control protein functions. We have recently proposed a dynamical description of multisite protein modification which embodies all the essential features of the…

Biological Physics · Physics 2007-05-23 Edoardo Milotti , Alessio Del Fabbro , Chiara Dalla Pellegrina , Roberto Chignola

Particularly motivated by DNA storage channels, we consider channels with synchronization errors modeled as insertions and deletions, along with substitutions. We focus on the case where the synchronization error process has memory and…

Information Theory · Computer Science 2026-04-14 Ruslan Morozov , Tolga M. Duman

Multistability -- the emergence of multiple stable states under identical conditions -- is a hallmark of nonlinear complexity and an enabling mechanism for multilevel optical memory and photonic computing. Its realization in a compact…

Optics · Physics 2025-11-18 Zhen Liu , Xuefan Yin , Andrey Bogdanov , Yujia Nie , Yi Zuo , Hongbin Li , Feifan Wang , Chao Peng

Changes in a cell's external or internal conditions are usually reflected in the concentrations of the relevant transcription factors. These proteins in turn modulate the expression levels of the genes under their control and sometimes need…

Molecular Networks · Quantitative Biology 2013-08-01 Gasper Tkacik , Curtis G Callan , William Bialek

Hypercycles are information integration systems which are thought to overcome the information crisis of prebiotic evolution by ensuring the coexistence of several short templates. For imperfect template replication, we derive a simple…

Populations and Evolution · Quantitative Biology 2008-06-13 Daniel A. M. M. Silvestre , Jose F. Fontanari

In this work, we evaluate a multitude of metal-oxide bi-layers and demonstrate the benefits from increased memory stability via multibit memory operation. We introduce a programming methodology that allows for operating metal-oxide…

Mesoscale and Nanoscale Physics · Physics 2017-04-12 Spyros Stathopoulos , Ali Khiat , Maria Trapatseli , Simone Cortese , Alexandrou Serb , Ilia Valov , Themis Prodromakis

The increasing capacity of modern computers, driven by Moore's Law, is accompanied by smaller noise margins and higher error rates. In this paper we propose a memory device, consisting of a ring of two identical overdamped bistable…

Adaptation and Self-Organizing Systems · Physics 2009-11-05 S. A. Ibáñez , P. I. Fierens , G. A. Patterson , R. P. J. Perazzo , D. F. Grosz

Digital information can be encoded in the building-block sequence of macro-molecules, such as RNA and single-stranded DNA. Methods of "writing" and "reading" macromolecular strands are currently available, but they are slow and expensive.…

Emerging Technologies · Computer Science 2017-09-14 Masud Mansuripur , Pramod Khulbe

Phase change memory has been developed into a mature technology capable of storing information in a fast and non-volatile way, with potential for neuromorphic computing applications. However, its future impact in electronics depends…

Diffraction drastically limits the bit density in optical data storage. To increase the storage density, alternative strategies involving supplementary recording dimensions and robust read-out schemes must be explored. Here, we propose to…

Applied Physics · Physics 2020-01-28 Peter R. Wiecha , Aurélie Lecestre , Nicolas Mallet , Guilhem Larrieu

We report on the quantum storage and retrieval of photonic polarization quantum bits onto and out of a solid state storage device. The qubits are implemented with weak coherent states at the single photon level, and are stored for 500 ns in…