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Related papers: Random Boolean Networks

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We study how the dynamics of a class of discrete dynamical system models for neuronal networks depends on the connectivity of the network. Specifically, we assume that the network is an Erd\H{o}s-R\'{enyi} random graph and analytically…

Dynamical Systems · Mathematics 2014-04-23 Winfried Just , Sungwoo Ahn

Boolean networks have been the object of much attention, especially since S. Kauffman proposed them in the 1960's as models for gene regulatory networks. These systems are characterized by being defined on a Boolean state space and by…

Molecular Networks · Quantitative Biology 2007-11-21 German A. Enciso , Winfried Just

The attractors of Boolean networks and their basins have been shown to be highly relevant for model validation and predictive modelling, e.g., in systems biology. Yet there are currently very few tools available that are able to compute and…

Dynamical Systems · Mathematics 2018-07-27 Hannes Klarner , Frederike Heinitz , Sarah Nee , Heike Siebert

We study classes of dynamical systems that can be obtained by constructing recursive networks with monotone Boolean functions. Stack filters in nonlinear signal processing are special cases of such systems. We show an analytical connection…

Disordered Systems and Neural Networks · Physics 2009-07-28 Matti Nykter , Juha Kesseli , Ilya Shmulevich

In this paper, we analyse large random Boolean networks in terms of a constraint satisfaction problem. We first develop an algorithmic scheme which allows to prune simple logical cascades and under-determined variables, returning thereby…

Statistical Mechanics · Physics 2009-11-11 L. Correale , M. Leone , A. Pagnani , M. Weigt , R. Zecchina

Real networks exhibit heterogeneous nature with nodes playing far different roles in structure and function. To identify vital nodes is thus very significant, allowing us to control the outbreak of epidemics, to conduct advertisements for…

Physics and Society · Physics 2016-09-21 Linyuan Lü , Duanbing Chen , Xiao-Long Ren , Qian-Ming Zhang , Yi-Cheng Zhang , Tao Zhou

Complex networks has been a hot topic of research over the past several years over crossing many disciplines, starting from mathematics and computer science and ending by the social and biological sciences. Random graphs were studied to…

Computers and Society · Computer Science 2021-01-28 Alaa Eddin Alchalabi

We study directed random graphs (random graphs whose edges are directed), and present new results on the so-called strong components of those graphs. We provide analytic and simulation results on two special classes of strong component,…

Condensed Matter · Physics 2007-05-23 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

The use of random samples to approximate properties of geometric configurations has been an influential idea for both combinatorial and algorithmic purposes. This chapter considers two related notions---$\epsilon$-approximations and…

Computational Geometry · Computer Science 2017-08-09 Nabil H. Mustafa , Kasturi R. Varadarajan

We introduce a numerical method to study random Boolean networks with asynchronous stochas- tic update. Each node in the network of states starts with equal occupation probability and this probability distribution then evolves to a steady…

Statistical Mechanics · Physics 2015-05-18 Amer Shreim , Andrew Berdahl , Florian Greil , Jörn Davidsen , Maya Paczuski

This paper details a method for optimising the size of Boolean automata networks in order to compute their attractors under the parallel update schedule. This method relies on the formalism of modules introduced recently that allows for…

Logic in Computer Science · Computer Science 2020-07-21 Kévin Perrot , Pacôme Perrotin , Sylvain Sené

Random Threshold Networks with sparse, asymmetric connections show complex dynamical behavior similar to Random Boolean Networks, with a transition from ordered to chaotic dynamics at a critical average connectivity $K_c$. In this type of…

Statistical Mechanics · Physics 2009-11-07 Thimo Rohlf , Stefan Bornholdt

A model of Boolean agents competing in a market is presented where each agent bases his action on information obtained from a small group of other agents. The agents play a competitive game that rewards those in the minority. After a long…

Statistical Mechanics · Physics 2009-10-31 Maya Paczuski , Kevin E. Bassler , Alvaro Corral

The deterministic dynamics of randomly connected neural networks are studied, where a state of binary neurons evolves according to a discreet-time synchronous update rule. We give a theoretical support that the overlap of systems' states…

Statistical Mechanics · Physics 2015-03-10 Taro Toyoizumi , Haiping Huang

It is known that there are no more Lyndon words of length n than there are periodic necklaces of same length. This paper considers a similar problem where, additionally, the necklaces must be without some forbidden factors. This problem…

Discrete Mathematics · Computer Science 2016-05-06 Mathilde Noual

Virtually all real-world networks are dynamical entities. In social networks, the propensity of nodes to engage in social interactions (activity) and their chances to be selected by active nodes (attractiveness) are heterogeneously…

Physics and Society · Physics 2017-06-13 Laura Alessandretti , Kaiyuan Sun , Andrea Baronchelli , Nicola Perra

The poster presents an analytic formalism describing metric properties of undirected random graphs with arbitrary degree distributions and statistically uncorrelated (i.e. randomly connected) vertices. The formalism allows to calculate the…

Statistical Mechanics · Physics 2007-05-23 Agata Fronczak , Piotr Fronczak , Janusz A. Holyst

This paper is an extensive survey of literature on complex network communities and clustering. Complex networks describe a widespread variety of systems in nature and society especially systems composed by a large number of highly…

Social and Information Networks · Computer Science 2015-03-24 Biswajit Saha , Amitabha Mandal , Soumendu Bikas Tripathy , Debaprasad Mukherjee

The controllability and observability of Boolean control network(BCN) are two fundamental properties. But the verification of latter is much harder than the former. This paper considers the observability of BCN via controllability. First,…

Optimization and Control · Mathematics 2018-01-03 Daizhan Cheng , Changxi Li , Fenghua He

Boolean Networks have been used to study numerous phenomena, including gene regulation, neural networks, social interactions, and biological evolution. Here, we propose a general method for determining the critical behavior of Boolean…

Disordered Systems and Neural Networks · Physics 2009-11-11 Andre A. Moreira , Luis A. N. Amaral