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Related papers: Ion transport through cell membrane channels

200 papers

Membrane proteins constitute a large portion of the human proteome and perform a variety of important functions as membrane receptors, transport proteins, enzymes, signaling proteins, and more. The computational studies of membrane proteins…

Biological Physics · Physics 2017-04-25 Li Xiao , Jianxiong Diao , D Artagnan Greene , Junmei Wang , Ray Luo

It has been suggested that microtubules and other cytoskeletal filaments may act as electrical transmission lines. An electrical circuit model of the microtubule is constructed incorporating features of its cylindrical structure with…

Subcellular Processes · Quantitative Biology 2010-06-28 Holly Freedman , Vahid Rezania , Avner Priel , Eric Carpenter , Sergei Y. Noskovd , Jack A. Tuszynski

Molecular dynamics simulation is utilized to investigate the ionic transport of NaCl in solution through a graphene nanopore under an applied electric field. Results show the formation of concentration polarization layers in the vicinity of…

Biological Physics · Physics 2013-01-10 Guohui Hu , Mao Mao , Sandip Ghosal

Modeling of electron transport through organic molecules is presented in order to interpret the experimental data of Rosink et al. [PRB 62, 10459 (2000)]. Such results are understand as coherent off-resonance tunneling through the junction…

Soft Condensed Matter · Physics 2007-05-23 Kamil Walczak

The process of protons transport in molecular water chains is of fundamental interest for many biological systems. Although many features of such systems can be analyzed using large-scale computational modeling, other features are better…

Biological Physics · Physics 2011-08-23 Artem Korzhimanov , Mattias Marklund , Tatiana Shutova , Goran Samuelsson

We propose a microscopic, first-principles description of the ionic conduction in crystals. This formalism allows us to gain new insights into the ideal characteristics of general ionic conducting materials and, in particular, solid…

Materials Science · Physics 2021-11-05 Aleksandr Rodin , Keian Noori , Alexandra Carvalho , Antonio Helio Castro Neto

We present a simple one-dimensional trapping model prompted by the problem of ion current across biological membranes. The trap is modeled mimicking the ionic channel membrane behaviour. Such voltage-sensitive channels are open or closed…

Statistical Mechanics · Physics 2009-10-31 Alejandro D. Sanchez , Jorge A. Revelli , Horacio S. Wio

Ion transport underlies the operation of biological ion channels and governs the performance of electrochemical energy-storage devices. A long-standing anomaly is that smaller alkali metal ions, such as Li$^+$, migrate more slowly in water…

Soft Condensed Matter · Physics 2026-01-14 Zhenyu Wei , Mu Chen , Jun Ren , Pinyao He , Wei Xu , Wei Liu , Fei Zheng , Yin Zhang , Wei Si , Jinjie Sha , Zhonghua Ni , Yunfei Chen

Biological ion channels balance electrostatic and dehydration effects to yield large ion selectivities alongside high transport rates. These macromolecular systems are often interrogated through point mutations of their pore domain,…

Mesoscale and Nanoscale Physics · Physics 2019-07-19 Subin Sahu , Justin Elenewski , Christoph Rohmann , Michael Zwolak

We have investigated ion dynamics associated with a dual linear ion trap where ions can be stored in and moved between two distinct locations. Such a trap is a building block for a system to engineer arbitrary quantum states of ion…

We present theory for ion and water transport through reverse osmosis membranes based on a Maxwell-Stefan framework combined with hydrodynamic theory for the reduced motion of particles in thin pores. We include all driving forces and…

Chemical Physics · Physics 2018-03-07 Y. S. Oren , P. M. Biesheuvel

In this tutorial we discuss the chemical potential of ions in water (i.e., in a salt solution, in an electrolyte phase) and inside (charged) nanoporous materials such as porous membranes. In water treatment, such membranes are often used to…

Chemical Physics · Physics 2025-06-25 P. M. Biesheuvel

We present the state-of-the-art theoretical modeling, molecular simulation, and coarse-graining strategies for the transport of gases and liquids in nanoporous materials (pore size 1-100 nm). Special emphasis is placed on the transport of…

Soft Condensed Matter · Physics 2025-01-29 Alexander Schlaich , Jean-Louis Barrat , Benoit Coasne

The Poisson-Nernst-Planck (PNP) system is a standard model for describing ion transport. In many applications, e.g., ions in biological tissues, the presence of thin boundary layers poses both modelling and computational challenges. In a…

Biological Physics · Physics 2018-06-22 Zilong Song , Xiulei Cao , Huaxiong Huang

Ion transport in extremely narrow nanochannels has gained increasing interest in recent years due to its unique physical properties, and the technological advances that allow us to study them. It is tempting to approach this regime with the…

Soft Condensed Matter · Physics 2020-02-11 Amir Levy , J. Pedro de Souza , Martin Z Bazant

We present an analytical model of salt- and water-ion transport across an ion-selective interface based on an assumption of local equilibrium of the water-dissociation reaction. The model yields current-voltage characteristics and curves of…

Fluid Dynamics · Physics 2014-04-18 Christoffer P. Nielsen , Henrik Bruus

Electrostatic interaction between ions in an ionic channel and the charge fluctuations in the channel mouth are considered. It is shown that the charge fluctuations can be enhanced in the channels with low dielectric constant and result in…

Biological Physics · Physics 2007-05-23 D. G. Luchinsky , R. Tindjong , I. Kaufman , P. V. E. McClintock , R. S. Eisenberg

We present a stochastic approach for ion transport at the mesoscopic level. The description takes into account the self-consistent electric field generated by the fixed and mobile charges as well as the discrete nature of these latter. As…

Statistical Mechanics · Physics 2015-03-17 David Andrieux , Pierre Gaspard

Ionic transport within charged nanopores is commonly represented by resistor-capacitor transmission line circuits, where charging electrical double layers are modeled as capacitors, and the resistance to ionic current is modeled as…

Chemical Physics · Physics 2025-05-19 Filipe Henrique , Ankur Gupta

Recent single molecule experiments probing the passage process of a short single-stranded DNA (ssDNA) through a membrane channel (translocation) allow to measure the passage time distribution. Building on a recent modelling approach (D. K.…

Statistical Mechanics · Physics 2009-11-10 Ralf Metzler , Joseph Klafter