Related papers: Matroid Pathwidth and Code Trellis Complexity
We introduce greedy weights of matroids, inspired by those for linear codes. We show that a Wei duality holds for two of these types of greedy weights for matroids. Moreover we show that in the cases where the matroids involved are…
We consider the problem of finding a subgraph of a given graph which minimizes the sum of given functions at vertices evaluated at their subgraph degrees. While the problem is NP-hard already when all functions are the same, we show that it…
I consider the problem of learning an optimal path graphical model from data and show the problem to be NP-hard for the maximum likelihood and minimum description length approaches and a Bayesian approach. This hardness result holds despite…
Discrete polymatroids are the multi-set analogue of matroids. In this paper, we explore the connections among linear network coding, linear index coding and representable discrete polymatroids. We consider vector linear solutions of…
Given a matroid M on the ground set E, the Bergman fan B(M), or space of M-ultrametrics, is a polyhedral complex in R^E which arises in several different areas, such as tropical algebraic geometry, dynamical systems, and phylogenetics.…
The graph parameter treedepth is minor-monotone; hence, the class of graphs with treedepth at most $k$ is minor-closed. By the Graph Minor Theorem, such a class is characterized by a finite set of forbidden minors. A conjecture of…
Deciding whether a graph can be embedded in a grid using only unit-length edges is NP-complete, even when restricted to binary trees. However, it is not difficult to devise a number of graph classes for which the problem is polynomial, even…
Graphs with bounded treewidth and bounded maximum degree are known to have tree-partitions of bounded width. What can be said if the bounded treewidth assumption is strengthened to bounded pathwidth? We prove that every graph with bounded…
Square grids play a pivotal role in Robertson and Seymour's work on graph minors as planar obstructions to small treewidth. We introduce a three-sided bramble in a plane graph called a net, which generalizes the standard bramble of crosses…
In the Maximize Phylogenetic Diversity problem, we are given a phylogenetic tree that represents the genetic proximity of species, and we are asked to select a subset of species of maximum phylogenetic diversity to be preserved through…
The Pathwidth Theorem states that if a class of graphs has unbounded pathwidth, then it contains all trees as graph minors. We prove a similar result for dense graphs. More precisely, we give a finite family of tree-like patterns and prove…
For a graph $G$, a subset $S \subseteq V(G)$ is called a \emph{resolving set} if for any two vertices $u,v \in V(G)$, there exists a vertex $w \in S$ such that $d(w,u) \neq d(w,v)$. The {\sc Metric Dimension} problem takes as input a graph…
The s-Club problem asks, for a given undirected graph $G$, whether $G$ contains a vertex set $S$ of size at least $k$ such that $G[S]$, the subgraph of $G$ induced by $S$, has diameter at most $s$. We consider variants of $s$-Club where one…
We study paving matroids, their realization spaces, and their closures, along with matroid varieties and circuit varieties. Within this context, we introduce three distinct methods for generating polynomials within the associated ideals of…
In geographic information systems and in the production of digital maps for small devices with restricted computational resources one often wants to round coordinates to a rougher grid. This removes unnecessary detail and reduces space…
Given a connected undirected weighted graph, we are concerned with problems related to partitioning the graph. First of all we look for the closest disconnected graph (the minimum cut problem), here with respect to the Euclidean norm. We…
Matroid theory is fundamentally connected with index coding and network coding problems. In fact, the reliance of linear index coding and network coding rates on the characteristic of a field has been demonstrated by using the two…
We study the parameterized complexity of the classical Edge Hamiltonian Path problem and give several fixed-parameter tractability results. First, we settle an open question of Demaine et al. by showing that Edge Hamiltonian Path is FPT…
We consider the Shallow-Light Steiner Network problem from a fixed-parameter perspective. Given a graph $G$, a distance bound $L$, and $p$ pairs of vertices $(s_1,t_1),\cdots,(s_p,t_p)$, the objective is to find a minimum-cost subgraph $G'$…
The problem Parsimony Haplotyping (PH) asks for the smallest set of haplotypes which can explain a given set of genotypes, and the problem Minimum Perfect Phylogeny Haplotyping (MPPH) asks for the smallest such set which also allows the…