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Domains like bioinformatics, version control systems, collaborative editing systems (wiki), and others, are producing huge data collections that are very repetitive. That is, there are few differences between the elements of the collection.…

Data Structures and Algorithms · Computer Science 2011-12-21 Sebastian Kreft , Gonzalo Navarro

Relative Lempel-Ziv (RLZ) is a popular algorithm for compressing databases of genomes from individuals of the same species when fast random access is desired. With Kuruppu et al.'s (SPIRE 2010) original implementation, a reference genome is…

Data Structures and Algorithms · Computer Science 2016-05-17 Anthony J. Cox , Andrea Farruggia , Travis Gagie , Simon J. Puglisi , Jouni Sirén

We propose a novel, lightweight supervised dictionary learning framework for text classification based on data compression and representation. This two-phase algorithm initially employs the Lempel-Ziv-Welch (LZW) algorithm to construct a…

Computation and Language · Computer Science 2024-05-06 Li Wan , Tansu Alpcan , Margreta Kuijper , Emanuele Viterbo

A new approach for combining non-binary low-density parity-check (NB-LDPC) codes with higher-order modulation and probabilistic amplitude shaping (PAS) is presented. Instead of symbol-metric decoding (SMD), a bit-metric decoder (BMD) is…

Information Theory · Computer Science 2018-09-12 Fabian Steiner , Georg Böcherer , Gianluigi Liva

Indexing highly repetitive collections has become a relevant problem with the emergence of large repositories of versioned documents, among other applications. These collections may reach huge sizes, but are formed mostly of documents that…

Information Retrieval · Computer Science 2016-05-25 Francisco Claude , Antonio Fariña , Miguel A. Martínez-Prieto , Gonzalo Navarro

Modern data compression methods are slowly reaching their limits after 80 years of research, millions of papers, and wide range of applications. Yet, the extravagant 6G communication speed requirement raises a major open question for…

Information Theory · Computer Science 2025-05-01 Ziguang Li , Chao Huang , Xuliang Wang , Haibo Hu , Cole Wyeth , Dongbo Bu , Quan Yu , Wen Gao , Xingwu Liu , Ming Li

The problem of lossless data compression with side information available to both the encoder and the decoder is considered. The finite-blocklength fundamental limits of the best achievable performance are defined, in two different versions…

Information Theory · Computer Science 2021-02-23 Lampros Gavalakis , Ioannis Kontoyiannis

As large language models (LLMs) continue to be deployed and utilized across domains, the volume of LLM-generated data is growing rapidly. This trend highlights the increasing importance of effective and lossless compression for such data in…

Machine Learning · Computer Science 2025-05-13 Yu Mao , Holger Pirk , Chun Jason Xue

Relative Lempel-Ziv (RLZ) parsing is a dictionary compression method in which a string $S$ is compressed relative to a second string $R$ (called the reference) by parsing $S$ into a sequence of substrings that occur in $R$. RLZ is…

Data Structures and Algorithms · Computer Science 2022-08-25 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow

The Block Tree (BT) is a novel compact data structure designed to compress sequence collections. It obtains compression ratios close to Lempel-Ziv and supports efficient direct access to any substring. The BT divides the text recursively…

Data Structures and Algorithms · Computer Science 2018-03-06 Nieves R. Brisaboa , Travis Gagie , Adrián Gómez-Brandón , Gonzalo Navarro

The encoder and decoder for lossy data compression of binary memoryless sources are developed on the basis of a specific-type nonmonotonic perceptron. Statistical mechanical analysis indicates that the potential ability of the…

Information Theory · Computer Science 2009-11-11 Tadaaki Hosaka , Yoshiyuki Kabashima

There are several ways to measure the compressibility of a random measure; they include general approaches such as using the rate-distortion curve, as well as more specific notions, such as the Renyi information dimension (RID). The RID…

Information Theory · Computer Science 2022-03-09 Mohammad-Amin Charusaie , Arash Amini , Stefano Rini

The Symmetric Information Bottleneck (SIB), an extension of the more familiar Information Bottleneck, is a dimensionality reduction technique that simultaneously compresses two random variables to preserve information between their…

Information Theory · Computer Science 2024-02-06 K. Michael Martini , Ilya Nemenman

Locally Differentially Private (LDP) Reports are commonly used for collection of statistics and machine learning in the federated setting. In many cases the best known LDP algorithms require sending prohibitively large messages from the…

Cryptography and Security · Computer Science 2021-02-25 Vitaly Feldman , Kunal Talwar

This work proposes to reduce visibility data volume using a baseline-dependent lossy compression technique that preserves smearing at the edges of the field-of-view. We exploit the relation of the rank of a matrix and the fact that a…

Instrumentation and Methods for Astrophysics · Physics 2023-04-17 M Atemkeng , S Perkins , E Seck , S Makhathini , O Smirnov , L Bester , B Hugo

We describe a universal information compression scheme that compresses any pure quantum i.i.d. source asymptotically to its von Neumann entropy, with no prior knowledge of the structure of the source. We introduce a diagonalisation…

Quantum Physics · Physics 2007-05-23 Richard Jozsa , Stuart Presnell

Soft context compression reduces the computational workload of processing long contexts in LLMs by encoding long context into a smaller number of latent tokens. However, existing frameworks apply uniform compression ratios, failing to…

Computation and Language · Computer Science 2026-03-30 Yijiong Yu , Shuai Yuan , Jie Zheng , Huazheng Wang , Ji Pei

While the language modeling objective has been shown to be deeply connected with compression, it is surprising that modern LLMs are not employed in practical text compression systems. In this paper, we provide an in-depth analysis of neural…

Computation and Language · Computer Science 2024-09-26 Fazal Mittu , Yihuan Bu , Akshat Gupta , Ashok Devireddy , Alp Eren Ozdarendeli , Anant Singh , Gopala Anumanchipalli

The sensitivity of a string compression algorithm $C$ asks how much the output size $C(T)$ for an input string $T$ can increase when a single character edit operation is performed on $T$. This notion enables one to measure the robustness of…

Data Structures and Algorithms · Computer Science 2023-02-10 Tooru Akagi , Mitsuru Funakoshi , Shunsuke Inenaga

During the training of Large Language Models (LLMs), tensor data is periodically "checkpointed" to persistent storage to allow recovery of work done in the event of failure. The volume of data that must be copied during each checkpoint,…

Machine Learning · Computer Science 2025-05-16 Daniel Waddington , Cornel Constantinescu