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Genealogical networks, also known as family trees or population pedigrees, are commonly studied by genealogists wanting to know about their ancestry, but they also provide a valuable resource for disciplines such as digital demography,…

Social and Information Networks · Computer Science 2018-02-19 Eric Malmi , Aristides Gionis , Arno Solin

Many real-world networks known as attributed networks contain two types of information: topology information and node attributes. It is a challenging task on how to use these two types of information to explore structural regularities. In…

Physics and Society · Physics 2019-01-28 Zhenhai Chang , Caiyan Jia , Xianjun Yin , Yimei Zheng

Networks are widely used in the biological, physical, and social sciences as a concise mathematical representation of the topology of systems of interacting components. Understanding the structure of these networks is one of the outstanding…

Data Analysis, Statistics and Probability · Physics 2007-06-21 M. E. J. Newman , E. A. Leicht

Artificial intelligence (AI) is transforming cancer diagnosis and treatment. The intricate nature of this disease necessitates the collaboration of diverse stakeholders with varied expertise to ensure the effectiveness of cancer research.…

Digital Libraries · Computer Science 2025-12-30 Shahab Mosallaie , Andrea Schiffauerova , Ashkan Ebadi

Discovering community structure in complex networks is a mature field since a tremendous number of community detection methods have been introduced in the literature. Nevertheless, it is still very challenging for practioners to determine…

Social and Information Networks · Computer Science 2021-04-15 Vinh-Loc Dao , Cécile Bothorel , Philippe Lenca

Co-authorship networks, where nodes represent authors and edges represent co-authorship relations, are key to understanding the production and diffusion of knowledge in academia. Social constructs, biases (implicit and explicit), and…

Social and Information Networks · Computer Science 2023-05-04 Ana Maria Jaramillo , Hywel T. P. Williams , Nicola Perra , Ronaldo Menezes

This paper examines the proximity of authors to those they cite using degrees of separation in a co-author network, essentially using collaboration networks to expand on the notion of self-citations. While the proportion of direct…

Physics and Society · Physics 2015-05-28 Matthew L. Wallace , Vincent Larivière , Yves Gingras

In this paper we present a new version of a network growth model, generalized in order to describe the behavior of social networks. The case of study considered is the preprint archive at cul.arxiv.org. Each node corresponds to a scientist,…

Condensed Matter · Physics 2009-11-10 Michele Catanzaro , Guido Caldarelli , Luciano Pietronero

We propose a method for gene expression based analysis of cancer phenotypes incorporating network biology knowledge through unsupervised construction of computational graphs. The structural construction of the computational graphs is driven…

Molecular Networks · Quantitative Biology 2020-10-02 Paul Scherer , Maja Trȩbacz , Nikola Simidjievski , Zohreh Shams , Helena Andres Terre , Pietro Liò , Mateja Jamnik

With the recent explosion of publicly available biological data, the analysis of networks has gained significant interest. In particular, recent promising results in Neuroscience show that the way neurons and areas of the brain are…

Social and Information Networks · Computer Science 2015-11-17 Umberto Esposito , Eleni Vasilaki

Bipartite networks provide an effective resource for representing, characterizing, and modeling several abstract and real-world systems and structures involving binary relations, which include food webs, social interactions, and…

Social and Information Networks · Computer Science 2024-02-01 Alexandre Benatti , Luciano da F. Costa

With the recent availability of tissue-specific gene expression data, e.g., provided by the GTEx Consortium, there is interest in comparing gene co-expression patterns across tissues. One promising approach to this problem is to use a…

Molecular Networks · Quantitative Biology 2023-12-11 Madison Russell , Alber Aqil , Marie Saitou , Omer Gokcumen , Naoki Masuda

Community detection and hierarchy extraction are usually thought of as separate inference tasks on networks. Considering only one of the two when studying real-world data can be an oversimplification. In this work, we present a generative…

Social and Information Networks · Computer Science 2022-06-03 Laura Iacovissi , Caterina De Bacco

GitHub Copilot, an extension for the Visual Studio Code development environment powered by the large-scale language model Codex, makes automatic program synthesis available for software developers. This model has been extensively studied in…

Software Engineering · Computer Science 2021-11-16 Dominik Sobania , Martin Briesch , Franz Rothlauf

In a range of scientific coauthorship networks, transitions emerge in degree distributions, correlations between degrees and local clustering coefficients, etc. The existence of those transitions could be regarded as a result of the…

Physics and Society · Physics 2018-06-19 Zheng Xie , Enming Dong , Dongyun Yi , Ouyang Zhenzheng , Jianping Li

Heterogeneous molecular entities and their interactions, commonly depicted as a network, are crucial for advancing our systems-level understanding of biology. With recent advancements in high-throughput data generation and a significant…

Quantitative Methods · Quantitative Biology 2026-03-18 Kishan KC , Rui Li , Paribesh Regmi , Anne R. Haake

The advent of online social networks has led to the development of an abundant literature on the study of online social groups and their relationship to individuals' personalities as revealed by their textual productions. Social structures…

Social and Information Networks · Computer Science 2024-06-26 Ixandra Achitouv , David Chavalarias , Bruno Gaume

This paper is an extensive survey of literature on complex network communities and clustering. Complex networks describe a widespread variety of systems in nature and society especially systems composed by a large number of highly…

Social and Information Networks · Computer Science 2015-03-24 Biswajit Saha , Amitabha Mandal , Soumendu Bikas Tripathy , Debaprasad Mukherjee

Community structure analysis is a powerful tool for social networks, which can simplify their topological and functional analysis considerably. However, since community detection methods have random factors and real social networks obtained…

Physics and Society · Physics 2015-05-11 Hui-Jia Li , J J. Daniels

We describe collaboration networks consisting of research projects funded by the European Union and the organizations involved in those projects. The networks are of substantial size and complexity, but are important to understand due to…

Physics and Society · Physics 2007-05-23 M. J. Barber , A. Krueger , T. Krueger , T. Roediger-Schluga
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