Writhing Geometry of Open DNA
Biological Physics
2009-09-07 v1 Soft Condensed Matter
Classical Physics
q-bio
Abstract
Motivated by recent experiments on DNA torsion-force-extension characteristics we consider the writhing geometry of open stiff molecules. We exhibit a cyclic motion which allows arbitrarily large twisting of the end of a molecule via an activated process. This process is suppressed for forces larger than femto-Newtons which allows us to show that experiments are sensitive to a generalization of the Calugareanu-White formula for the writhe. Using numerical methods we compare this formulation of the writhe with recent analytic calculations.
Keywords
Cite
@article{arxiv.physics/0301028,
title = {Writhing Geometry of Open DNA},
author = {V. Rossetto and A. C. Maggs},
journal= {arXiv preprint arXiv:physics/0301028},
year = {2009}
}
Comments
12 pages 10 figures. Revtex4