van't Hoff-Arrhenius Analysis of Mesoscopic and Macroscopic Dynamics of Simple Biochemical Systems: Stochastic vs. Nonlinear Bistabilities
Abstract
Multistability of mesoscopic, driven biochemical reaction systems has implications to a wide range of cellular processes. Using several simple models, we show that one class of bistable chemical systems has a deterministic counterpart in the nonlinear dynamics based on the Law of Mass Action, while another class, widely known as noise-induced stochastic bistability, does not. Observing the system's volume () playing a similar role as the inverse temperature () in classical rate theory, an van't Hoff-Arrhenius like analysis is introduced. In one-dimensional systems, a transition rate between two states, represented in terms of a barrier in the landscape for the dynamics , , can be understood from a decomposition . Nonlinear bistability means while stochastic bistability has but . Stochastic bistabilities can be viewed as remants (or "ghosts) of nonlinear bifurcations or extinction phenomenon, and and as "enthalpic" and "entropic" barriers to a transition.
Keywords
Cite
@article{arxiv.1011.2554,
title = {van't Hoff-Arrhenius Analysis of Mesoscopic and Macroscopic Dynamics of Simple Biochemical Systems: Stochastic vs. Nonlinear Bistabilities},
author = {Yunxin Zhang and Hao Ge and Hong Qian},
journal= {arXiv preprint arXiv:1011.2554},
year = {2010}
}