Transferable Learning of Reaction Pathways from Geometric Priors
Abstract
Identifying minimum-energy paths (MEPs) is crucial for understanding chemical reaction mechanisms but remains computationally demanding. We introduce MEPIN, a scalable machine-learning method for efficiently predicting MEPs from reactant and product configurations, without relying on transition-state geometries or pre-optimized reaction paths during training. The task is defined as predicting deviations from geometric interpolations along reaction coordinates. We address this task with a continuous reaction path model based on a symmetry-broken equivariant neural network that generates a flexible number of intermediate structures. The model is trained using an energy-based objective, with efficiency enhanced by incorporating geometric priors from geodesic interpolation as initial interpolations or pre-training objectives. Our approach generalizes across diverse chemical reactions and achieves accurate alignment with reference intrinsic reaction coordinates, as demonstrated on various small molecule reactions and [3+2] cycloadditions. Our method enables the exploration of large chemical reaction spaces with efficient, data-driven predictions of reaction pathways.
Keywords
Cite
@article{arxiv.2504.15370,
title = {Transferable Learning of Reaction Pathways from Geometric Priors},
author = {Juno Nam and Miguel Steiner and Max Misterka and Soojung Yang and Avni Singhal and Rafael Gómez-Bombarelli},
journal= {arXiv preprint arXiv:2504.15370},
year = {2026}
}
Comments
14 pages, 6 figures; Supporting Information in ancillary files