English

Towards an Evolvable Cancer Treatment Simulator

Neural and Evolutionary Computing 2022-12-05 v3 Artificial Intelligence Computational Engineering, Finance, and Science Multiagent Systems

Abstract

The use of high-fidelity computational simulations promises to enable high-throughput hypothesis testing and optimisation of cancer therapies. However, increasing realism comes at the cost of increasing computational requirements. This article explores the use of surrogate-assisted evolutionary algorithms to optimise the targeted delivery of a therapeutic compound to cancerous tumour cells with the multicellular simulator, PhysiCell. The use of both Gaussian process models and multi-layer perceptron neural network surrogate models are investigated. We find that evolutionary algorithms are able to effectively explore the parameter space of biophysical properties within the agent-based simulations, minimising the resulting number of cancerous cells after a period of simulated treatment. Both model-assisted algorithms are found to outperform a standard evolutionary algorithm, demonstrating their ability to perform a more effective search within the very small evaluation budget. This represents the first use of efficient evolutionary algorithms within a high-throughput multicellular computing approach to find therapeutic design optima that maximise tumour regression.

Keywords

Cite

@article{arxiv.1812.08252,
  title  = {Towards an Evolvable Cancer Treatment Simulator},
  author = {Richard J. Preen and Larry Bull and Andrew Adamatzky},
  journal= {arXiv preprint arXiv:1812.08252},
  year   = {2022}
}