English

Speeding up a single-molecule DNA motor with a simple catalyst

Soft Condensed Matter 2009-11-10 v2 Other Condensed Matter

Abstract

We demonstrate a catalytic control method for speeding up the single-molecule DNA motor introduced by Li and Tan [Nano Lett. {\bf 2}, 315 (2002)]. A key rate-limiting barrier in the reaction part of the cycle is the tendency for the second fuel strand BB to fold into the chair-like configuration of the original motor strand MM. This seriously impedes the restoration reaction. We have designed a catalytic strand to inhibit the folding of BB. Introduction of the catalyst speeds up the restoration reaction by roughly a factor of 2. The catalyst shows robust behavior for more than one cycle. The experimental data can be understood with a model with intermediate products. This technique provides dynamic control of the restoration rate of the motor without affecting the straightening rate.

Keywords

Cite

@article{arxiv.cond-mat/0412287,
  title  = {Speeding up a single-molecule DNA motor with a simple catalyst},
  author = {Yufang Wang and Y. Zhang and N. P. Ong},
  journal= {arXiv preprint arXiv:cond-mat/0412287},
  year   = {2009}
}

Comments

6 pages, 5 figures New figure (Fig. 6) and appendix added. Text revised

R2 v1 2026-07-22T11:11:25.516Z