Speeding up a single-molecule DNA motor with a simple catalyst
Abstract
We demonstrate a catalytic control method for speeding up the single-molecule DNA motor introduced by Li and Tan [Nano Lett. {\bf 2}, 315 (2002)]. A key rate-limiting barrier in the reaction part of the cycle is the tendency for the second fuel strand to fold into the chair-like configuration of the original motor strand . This seriously impedes the restoration reaction. We have designed a catalytic strand to inhibit the folding of . Introduction of the catalyst speeds up the restoration reaction by roughly a factor of 2. The catalyst shows robust behavior for more than one cycle. The experimental data can be understood with a model with intermediate products. This technique provides dynamic control of the restoration rate of the motor without affecting the straightening rate.
Keywords
Cite
@article{arxiv.cond-mat/0412287,
title = {Speeding up a single-molecule DNA motor with a simple catalyst},
author = {Yufang Wang and Y. Zhang and N. P. Ong},
journal= {arXiv preprint arXiv:cond-mat/0412287},
year = {2009}
}
Comments
6 pages, 5 figures New figure (Fig. 6) and appendix added. Text revised