English

Single Chain Force Spectroscopy: Sequence Dependence

Soft Condensed Matter 2009-11-07 v1 Disordered Systems and Neural Networks q-bio

Abstract

We study the elastic properties of a single A/B copolymer chain with a specific sequence. We predict a rich structure in the force extension relations which can be addressed to the sequence. The variational method is introduced to probe local minima on the path of stretching and releasing. At given force, we find multiple configurations which are separated by energy barriers. A collapsed globular configuration consists of several domains which unravel cooperatively. Upon stretching, unfolding path shows stepwise pattern corresponding to the unfolding of each domain. While releasing, several cores can be created simultaneously in the middle of the chain resulting in a different path of collapse.

Keywords

Cite

@article{arxiv.cond-mat/0110581,
  title  = {Single Chain Force Spectroscopy: Sequence Dependence},
  author = {Namkyung Lee and Thomas A. Vilgis},
  journal= {arXiv preprint arXiv:cond-mat/0110581},
  year   = {2009}
}

Comments

6 pages 3 figures