English

Scale-Space Splatting: Reforming Spacetime for the Cross-Scale Exploration of Integral Measures in Molecular Dynamics

Computational Physics 2019-10-10 v1

Abstract

Understanding large amounts of spatiotemporal data from particle-based simulations, such as molecular dynamics, often relies on the computation and analysis of aggregate measures. These, however, by virtue of aggregation, hide structural information about the space/time localization of the studied phenomena. This leads to degenerate cases where the measures fail to capture distinct behaviour. In order to drill into these aggregate values, we propose a multi-scale visual exploration technique. Our novel representation, based on partial domain aggregation, enables the construction of a continuous scale-space for discrete datasets and the simultaneous exploration of scales in both space and time. We link these two scale-spaces in a scale-space space-time cube and model linked views as orthogonal slices through this cube, thus enabling the rapid identification of spatio-temporal patterns at multiple scales. To demonstrate the effectiveness of our approach, we showcase an advanced exploration of a protein-ligand simulation.

Keywords

Cite

@article{arxiv.1907.09939,
  title  = {Scale-Space Splatting: Reforming Spacetime for the Cross-Scale Exploration of Integral Measures in Molecular Dynamics},
  author = {Juraj Pálenik and Jan Byška and Stefan Bruckner and Helwig Hauser},
  journal= {arXiv preprint arXiv:1907.09939},
  year   = {2019}
}

Comments

11 pages, 9 figures, IEEE SciVis 2019