English

ReStainGAN: Leveraging IHC to IF Stain Domain Translation for in-silico Data Generation

Image and Video Processing 2024-03-12 v1 Artificial Intelligence Computer Vision and Pattern Recognition Machine Learning

Abstract

The creation of in-silico datasets can expand the utility of existing annotations to new domains with different staining patterns in computational pathology. As such, it has the potential to significantly lower the cost associated with building large and pixel precise datasets needed to train supervised deep learning models. We propose a novel approach for the generation of in-silico immunohistochemistry (IHC) images by disentangling morphology specific IHC stains into separate image channels in immunofluorescence (IF) images. The proposed approach qualitatively and quantitatively outperforms baseline methods as proven by training nucleus segmentation models on the created in-silico datasets.

Keywords

Cite

@article{arxiv.2403.06545,
  title  = {ReStainGAN: Leveraging IHC to IF Stain Domain Translation for in-silico Data Generation},
  author = {Dominik Winter and Nicolas Triltsch and Philipp Plewa and Marco Rosati and Thomas Padel and Ross Hill and Markus Schick and Nicolas Brieu},
  journal= {arXiv preprint arXiv:2403.06545},
  year   = {2024}
}

Comments

4 pages, 1 figure