English

Resonant effects in a voltage-activated channel gating

Statistical Mechanics 2009-11-11 v1

Abstract

The non-selective voltage activated cation channel from the human red cells, which is activated at depolarizing potentials, has been shown to exhibit counter-clockwise gating hysteresis. We have analyzed the phenomenon with the simplest possible phenomenological models by assuming 2×22\times 2 discrete states, i.e. two normal open/closed states with two different states of ``gate tension.'' Rates of transitions between the two branches of the hysteresis curve have been modeled with single-barrier kinetics by introducing a real-valued ``reaction coordinate'' parameterizing the protein's conformational change. When described in terms of the effective potential with cyclic variations of the control parameter (an activating voltage), this model exhibits typical ``resonant effects'': synchronization, resonant activation and stochastic resonance. Occurrence of the phenomena is investigated by running the stochastic dynamics of the model and analyzing statistical properties of gating trajectories.

Keywords

Cite

@article{arxiv.cond-mat/0610826,
  title  = {Resonant effects in a voltage-activated channel gating},
  author = {Ewa Gudowska-Nowak and Bartlomiej Dybiec and Henrik Flyvbjerg},
  journal= {arXiv preprint arXiv:cond-mat/0610826},
  year   = {2009}
}

Comments

12 pages, 9 figures

R2 v1 2026-07-22T11:39:05.887Z