Relative knot probabilities in confined lattice polygons
Abstract
In this paper we examine the relative knotting probabilities in a lattice model of ring polymers confined in a cavity. The model is of a lattice knot of size in the cubic lattice, confined to a cube of side-length and with volume sites. We use Monte Carlo algorithms to approximately enumerate the number of conformations of lattice knots in the confining cube. If is the number of conformations of a lattice polygon of length and knot type in a cube of volume , then the relative knotting probability of a lattice polygon to have knot type , relative to the probability that the polygon is the unknot (the trivial knot, denoted by ), is . We determine for various knot types up to six crossing knots. Our data show that these relative knotting probabilities are small so that the model is dominated by lattice polygons of knot type the unknot. Moreover, if the concentration of the monomers of the lattice knot is , then the relative knot probability increases with along a curve that flattens as the Hamiltonian state is approached.
Cite
@article{arxiv.2501.08835,
title = {Relative knot probabilities in confined lattice polygons},
author = {EJ Janse van Rensburg and E Orlandini and MC Tesi},
journal= {arXiv preprint arXiv:2501.08835},
year = {2025}
}
Comments
Updated version 10 March 2025 with rectified data in the tables, and in some of the figures