English

Quantitative and bond-traceable resonant X-ray optical tensors of organic molecules

Materials Science 2025-09-03 v1 Soft Condensed Matter Applied Physics Optics

Abstract

X-ray scattering at the carbon absorption edge is uniquely sensitive to local molecular bond identity and orientation in organic nanostructures, encoded as a function of photon energy and polarization. However, quantitative analysis is precluded due to the lack of accurate optical models with bond and orientation specificity. We generate such a model through an algorithm that parameterizes and refines density functional theory calculations with angle-resolved absorbance spectroscopy measurements. The resulting optical tensor is shown to reproduce data from samples with domains of different orientation and crystalline packing, enabling label-free orientation analyses of individual chemical moieties within molecular nanostructures using resonant X-rays.

Keywords

Cite

@article{arxiv.2509.01734,
  title  = {Quantitative and bond-traceable resonant X-ray optical tensors of organic molecules},
  author = {Victor Murcia and Obaid Alqahtani and Harlan Heilman and Brian A. Collins},
  journal= {arXiv preprint arXiv:2509.01734},
  year   = {2025}
}