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Physics-Informed Neural Networks for Biological $2\mathrm{D}{+}t$ Reaction-Diffusion Systems

Machine Learning 2026-04-21 v1 Quantitative Methods

Abstract

Physics-informed neural networks (PINNs) provide a powerful framework for learning governing equations of dynamical systems from data. Biologically-informed neural networks (BINNs) are a variant of PINNs that preserve the known differential operator structure (e.g., reaction-diffusion) while learning constitutive terms via trainable neural subnetworks, enforced through soft residual penalties. Existing BINN studies are limited to 1D+t1\mathrm{D}{+}t reaction-diffusion systems and focus on forward prediction, using the governing partial differential equation as a regulariser rather than an explicit identification target. Here, we extend BINNs to 2D+t2\mathrm{D}{+}t systems within a PINN framework that combines data preprocessing, BINN-based equation learning, and symbolic regression post-processing for closed-form equation discovery. We demonstrate the framework's real-world applicability by learning the governing equations of lung cancer cell population dynamics from time-lapse microscopy data, recovering 2D+t2\mathrm{D}{+}t reaction-diffusion models from experimental observations. The proposed framework is readily applicable to other spatio-temporal systems, providing a practical and interpretable tool for fast analytic equation discovery from data.

Keywords

Cite

@article{arxiv.2604.18548,
  title  = {Physics-Informed Neural Networks for Biological $2\mathrm{D}{+}t$ Reaction-Diffusion Systems},
  author = {William Lavery and Jodie A. Cochrane and Christian Olesen and Dagim S. Tadele and John T. Nardini and Sara Hamis},
  journal= {arXiv preprint arXiv:2604.18548},
  year   = {2026}
}
R2 v1 2026-07-01T12:18:49.507Z