PhysiBoSS is an open-source platform that integrates agent-based modeling of cell populations with intracellular stochastic Boolean networks, enabling multiscale simulations of complex biological behaviors. To promote model sharing and versioning, we present the PhysiBoSS-Models database: a curated repository for multiscale models built with PhysiBoSS. By providing a simple Python API, PhysiBoSS-Models provides an easy way to download and simulate preexisting models through tools such as PhysiCell Studio. By providing standardized access to validated models, PhysiBoSS-Models facilitates reuse, validation, and benchmarking, supporting research in biology.
@article{arxiv.2508.05550,
title = {PhysiBoSS-Models: A database for multiscale models},
author = {Vincent Noel and Marco Ruscone and Randy Heiland and Arnau Montagud and Alfonso Valencia and Emmanuel Barillot and Paul Macklin and Laurence Calzone},
journal= {arXiv preprint arXiv:2508.05550},
year = {2025}
}