Overtwisting induces polygonal shapes in bent DNA
Abstract
By combining analytical results and simulations of various coarse-grained models we investigate the minimal energy shape of DNA minicircles which are torsionally constrained by an imposed over or undertwist. We show that twist-bend coupling, a cross interaction term discussed in the recent DNA literature, induces minimal energy shapes with a periodic alternance of parts with high and low curvature resembling rounded polygons. We briefly discuss the possible experimental relevance of these findings. We finally show that the twist and bending energies of minicircles are governed by renormalized stiffness constants, not the bare ones. This has important consequences for the analysis of experiments involving circular DNA meant to determine DNA elastic constants.
Keywords
Cite
@article{arxiv.1812.03701,
title = {Overtwisting induces polygonal shapes in bent DNA},
author = {Michele Caraglio and Enrico Skoruppa and Enrico Carlon},
journal= {arXiv preprint arXiv:1812.03701},
year = {2019}
}
Comments
11 pages, 7 figures