English

Ontology- and LLM-based Data Harmonization for Federated Learning in Healthcare

Machine Learning 2025-05-27 v1 Software Engineering

Abstract

The rise of electronic health records (EHRs) has unlocked new opportunities for medical research, but privacy regulations and data heterogeneity remain key barriers to large-scale machine learning. Federated learning (FL) enables collaborative modeling without sharing raw data, yet faces challenges in harmonizing diverse clinical datasets. This paper presents a two-step data alignment strategy integrating ontologies and large language models (LLMs) to support secure, privacy-preserving FL in healthcare, demonstrating its effectiveness in a real-world project involving semantic mapping of EHR data.

Keywords

Cite

@article{arxiv.2505.20020,
  title  = {Ontology- and LLM-based Data Harmonization for Federated Learning in Healthcare},
  author = {Natallia Kokash and Lei Wang and Thomas H. Gillespie and Adam Belloum and Paola Grosso and Sara Quinney and Lang Li and Bernard de Bono},
  journal= {arXiv preprint arXiv:2505.20020},
  year   = {2025}
}

Comments

Related dataset: https://doi.org/10.5281/zenodo.15411810