On necessary and sufficient conditions for proto-cell stationary growth
Abstract
We consider a generic proto-cell model consisting of any conservative chemical reaction network embedded within a membrane. The membrane results from the self-assembly of one of the chemical species (membrane precursor) and is semi-permeable to some other chemical species (nutrients) diffusing from an outside growth medium into the proto-cell. Inside the proto-cell, nutrients are metabolized into all other chemical species including the membrane precursor, and the membrane grows in area and the proto-cell in volume. Investigating the conditions under which such a proto-cell may reach stationary growth, we prove that a simple necessary condition is that each moiety be fed with some nutrient flux; and that a sufficient condition for the existence of a stationary growth regime is that every siphon containing any species participating in the membrane precursor incorporation kinetics also contains the support of a moiety that is fed with some nutrient flux. These necessary and sufficient conditions hold regardless of chemical reaction kinetics, membrane parameters or nutrient flux diffusion characteristics.
Keywords
Cite
@article{arxiv.1411.6772,
title = {On necessary and sufficient conditions for proto-cell stationary growth},
author = {Erwan Bigan and Stéphane Douady and Jean-Marc Steyaert},
journal= {arXiv preprint arXiv:1411.6772},
year = {2014}
}
Comments
Fifth International Workshop on Static Analysis and Systems Biology (SASB 2014), Munich, Sept 10, 2014. To be published in Electronic Notes in Theoretical Computer Science