English

Objective comparison of methods to decode anomalous diffusion

Data Analysis, Statistics and Probability 2025-08-25 v2 Soft Condensed Matter Biological Physics Quantitative Methods

Abstract

Deviations from Brownian motion leading to anomalous diffusion are found in transport dynamics from quantum physics to life sciences. The characterization of anomalous diffusion from the measurement of an individual trajectory is a challenging task, which traditionally relies on calculating the trajectory mean squared displacement. However, this approach breaks down for cases of practical interest, e.g., short or noisy trajectories, heterogeneous behaviour, or non-ergodic processes. Recently, several new approaches have been proposed, mostly building on the ongoing machine-learning revolution. To perform an objective comparison of methods, we gathered the community and organized an open competition, the Anomalous Diffusion challenge (AnDi). Participating teams applied their algorithms to a commonly-defined dataset including diverse conditions. Although no single method performed best across all scenarios, machine-learning-based approaches achieved superior performance for all tasks. The discussion of the challenge results provides practical advice for users and a benchmark for developers.

Keywords

Cite

@article{arxiv.2105.06766,
  title  = {Objective comparison of methods to decode anomalous diffusion},
  author = {Gorka Muñoz-Gil and Giovanni Volpe and Miguel Angel Garcia-March and Erez Aghion and Aykut Argun and Chang Beom Hong and Tom Bland and Stefano Bo and J. Alberto Conejero and Nicolás Firbas and Òscar Garibo i Orts and Alessia Gentili and Zihan Huang and Jae-Hyung Jeon and Hélène Kabbech and Yeongjin Kim and Patrycja Kowalek and Diego Krapf and Hanna Loch-Olszewska and Michael A. Lomholt and Jean-Baptiste Masson and Philipp G. Meyer and Seongyu Park and Borja Requena and Ihor Smal and Taegeun Song and Janusz Szwabiński and Samudrajit Thapa and Hippolyte Verdier and Giorgio Volpe and Artur Widera and Maciej Lewenstein and Ralf Metzler and Carlo Manzo},
  journal= {arXiv preprint arXiv:2105.06766},
  year   = {2025}
}

Comments

96 pages, 5 main figures, 1 table, 29 supplementary figures. This is the author's version of the article published in Nature Communications under CC BY 4.0. The final published version is available at https://doi.org/10.1038/s41467-021-26320-w

R2 v1 2026-06-24T02:06:41.114Z