English

Mitosis domain generalization in histopathology images -- The MIDOG challenge

Image and Video Processing 2022-12-19 v1 Computer Vision and Pattern Recognition Medical Physics Quantitative Methods

Abstract

The density of mitotic figures within tumor tissue is known to be highly correlated with tumor proliferation and thus is an important marker in tumor grading. Recognition of mitotic figures by pathologists is known to be subject to a strong inter-rater bias, which limits the prognostic value. State-of-the-art deep learning methods can support the expert in this assessment but are known to strongly deteriorate when applied in a different clinical environment than was used for training. One decisive component in the underlying domain shift has been identified as the variability caused by using different whole slide scanners. The goal of the MICCAI MIDOG 2021 challenge has been to propose and evaluate methods that counter this domain shift and derive scanner-agnostic mitosis detection algorithms. The challenge used a training set of 200 cases, split across four scanning systems. As a test set, an additional 100 cases split across four scanning systems, including two previously unseen scanners, were given. The best approaches performed on an expert level, with the winning algorithm yielding an F_1 score of 0.748 (CI95: 0.704-0.781). In this paper, we evaluate and compare the approaches that were submitted to the challenge and identify methodological factors contributing to better performance.

Keywords

Cite

@article{arxiv.2204.03742,
  title  = {Mitosis domain generalization in histopathology images -- The MIDOG challenge},
  author = {Marc Aubreville and Nikolas Stathonikos and Christof A. Bertram and Robert Klopleisch and Natalie ter Hoeve and Francesco Ciompi and Frauke Wilm and Christian Marzahl and Taryn A. Donovan and Andreas Maier and Jack Breen and Nishant Ravikumar and Youjin Chung and Jinah Park and Ramin Nateghi and Fattaneh Pourakpour and Rutger H. J. Fick and Saima Ben Hadj and Mostafa Jahanifar and Nasir Rajpoot and Jakob Dexl and Thomas Wittenberg and Satoshi Kondo and Maxime W. Lafarge and Viktor H. Koelzer and Jingtang Liang and Yubo Wang and Xi Long and Jingxin Liu and Salar Razavi and April Khademi and Sen Yang and Xiyue Wang and Mitko Veta and Katharina Breininger},
  journal= {arXiv preprint arXiv:2204.03742},
  year   = {2022}
}

Comments

19 pages, 9 figures, summary paper of the 2021 MICCAI MIDOG challenge