Maximum-entropy calculation of end-to-end distance distribution of force stretching chains
Abstract
Using the maximum-entropy method, we calculate the end-to-end distance distribution of the force stretched chain from the moments of the distribution, which can be obtained from the extension-force curves recorded in single-molecule experiments. If one knows force expansion of the extension through the th power of force, it is enough information to calculate the moments of the distribution. We examine the method with three force stretching chain models, Gaussian chain, free-joined chain and excluded-volume chain on two-dimension lattice. The method reconstructs all distributions precisely. We also apply the method to force stretching complex chain molecules: the hairpin and secondary structure conformations. We find that the distributions of homogeneous chains of two conformations are very different: there are two independent peaks in hairpin distribution; while only one peak is observed in the distribution of secondary structure conformations. Our discussion also shows that the end-to-end distance distribution may discover more critical physical information than the simpler extension-force curves can give.
Keywords
Cite
@article{arxiv.cond-mat/0212270,
title = {Maximum-entropy calculation of end-to-end distance distribution of force stretching chains},
author = {Luru Dai and Fei Liu and Zhong-can Ou-Yang},
journal= {arXiv preprint arXiv:cond-mat/0212270},
year = {2009}
}
Comments
13 pages, 14 figures