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Markov bases of binary graph models

Combinatorics 2007-06-13 v1 Commutative Algebra Statistics Theory Statistics Theory

Abstract

This paper is concerned with the topological invariant of a graph given by the maximum degree of a Markov basis element for the corresponding graph model for binary contingency tables. We describe a degree four Markov basis for the model when the underlying graph is a cycle and generalize this result to the complete bipartite graph K2,nK_{2,n}. We also give a combinatorial classification of degree two and three Markov basis moves as well as a Buchberger-free algorithm to compute moves of arbitrary given degree. Finally, we compute the algebraic degree of the model when the underlying graph is a forest.

Keywords

Cite

@article{arxiv.math/0308280,
  title  = {Markov bases of binary graph models},
  author = {Mike Develin and Seth Sullivant},
  journal= {arXiv preprint arXiv:math/0308280},
  year   = {2007}
}

Comments

24 pages, 1 figure