The decline in abundance of Lyman-α (Lyα) emitting galaxies at z≳6 is a powerful and commonly used probe to constrain the progress of cosmic reionization. We use the CoDaII simulation, which is a radiation hydrodynamic simulation featuring a box of ∼94 comoving Mpc side length, to compute the Lyα transmission properties of the intergalactic medium (IGM) at z∼5.8 to 7. Our results mainly confirm previous studies, i.e., we find a declining Lyα transmission with redshift and a large sightline-to-sightline variation. However, motivated by the recent discovery of blue Lyα peaks at high redshift, we also analyze the IGM transmission on the blue side, which shows a rapid decline at z≳6 of the blue transmission. This low transmission can be attributed not only to the presence of neutral regions but also to the residual neutral hydrogen within ionized regions, for which a density even as low as nHI∼10−9cm−3 (sometimes combined with kinematic effects) leads to a significantly reduced visibility. Still, we find that ∼1% of sightlines towards M1600AB∼−21 galaxies at z∼7 are transparent enough to allow a transmission of a blue Lyα peak. We discuss our results in the context of the interpretation of observations.
@article{arxiv.2004.14496,
title = {Lyman-alpha transmission properties of the intergalactic medium in the CoDaII simulation},
author = {Max Gronke and Pierre Ocvirk and Charlotte Mason and Jorryt Matthee and Sarah E. I. Bosman and Jenny G. Sorce and Joseph Lewis and Kyungjin Ahn and Dominique Aubert and Taha Dawoodbhoy and Ilian T. Iliev and Paul R. Shapiro and Gustavo Yepes},
journal= {arXiv preprint arXiv:2004.14496},
year = {2021}
}