Jansen-MIDAS: a multi-level photomicrograph segmentation software based on isotropic undecimated wavelets
Abstract
Image segmentation, the process of separating the elements within an image, is frequently used for obtaining information from photomicrographs. However, segmentation methods should be used with reservations: incorrect segmentation can mislead when interpreting regions of interest (ROI), thus decreasing the success rate of additional procedures. Multi-Level Starlet Segmentation (MLSS) and Multi-Level Starlet Optimal Segmentation (MLSOS) were developed to address the photomicrograph segmentation deficiency on general tools. These methods gave rise to Jansen-MIDAS, an open-source software which a scientist can use to obtain a multi-level threshold segmentation of his/hers photomicrographs. This software is presented in two versions: a text-based version, for GNU Octave, and a graphical user interface (GUI) version, for MathWorks MATLAB. It can be used to process several types of images, becoming a reliable alternative to the scientist.
Cite
@article{arxiv.1604.05921,
title = {Jansen-MIDAS: a multi-level photomicrograph segmentation software based on isotropic undecimated wavelets},
author = {Alexandre Fioravante de Siqueira and Flávio Camargo Cabrera and Wagner Massayuki Nakasuga and Aylton Pagamisse and Aldo Eloizo Job},
journal= {arXiv preprint arXiv:1604.05921},
year = {2016}
}
Comments
arXiv version: 25 pages, 10 figures