English

Implementing the Stochastics Brane Calculus in a Generic Stochastic Abstract Machine

Computational Engineering, Finance, and Science 2012-11-20 v1 Logic in Computer Science

Abstract

In this paper, we deal with the problem of implementing an abstract machine for a stochastic version of the Brane Calculus. Instead of defining an ad hoc abstract machine, we consider the generic stochastic abstract machine introduced by Lakin, Paulev\'e and Phillips. The nested structure of membranes is flattened into a set of species where the hierarchical structure is represented by means of names. In order to reduce the overhead introduced by this encoding, we modify the machine by adding a copy-on-write optimization strategy. We prove that this implementation is adequate with respect to the stochastic structural operational semantics recently given for the Brane Calculus. These techniques can be ported also to other stochastic calculi dealing with nested structures.

Cite

@article{arxiv.1211.4094,
  title  = {Implementing the Stochastics Brane Calculus in a Generic Stochastic Abstract Machine},
  author = {Marino Miculan and Ilaria Sambarino},
  journal= {arXiv preprint arXiv:1211.4094},
  year   = {2012}
}

Comments

In Proceedings MeCBIC 2012, arXiv:1211.3476

R2 v1 2026-06-21T22:40:01.329Z