English

Impacting the bioscience progress by backporting software for Bio-Linux

Operating Systems 2013-10-08 v1 Software Engineering

Abstract

In year 2006 Bio-Linux with the work of Tim Booth and team gives its rising and provide an operating system that was and still specialized in providing a bioinformatic specific software environment for the working needs in this corner of bioscience. It is shown that Bio-Linux is affected by a 2 year release cycle and with this the final releases of Bio-Linux will not have the latest bioinformatic software on board. The paper shows how to get around this huge time gap and bring new software for Bio-Linux on board through a process that is called backporting. A summary of within the work to this paper just backported bioinformatic tools is given. A describtion of a workflow for continuously integration of the newest bioinformatic tools gives an outlook to further concrete planned developments and the influence of speeding up scientific progress.

Cite

@article{arxiv.1310.1588,
  title  = {Impacting the bioscience progress by backporting software for Bio-Linux},
  author = {Sasa Paporovic},
  journal= {arXiv preprint arXiv:1310.1588},
  year   = {2013}
}

Comments

10 pages,2 Figures, 1 Table and 1 notice

R2 v1 2026-06-22T01:41:13.349Z