Genomics · Quantitative Biology
Multimodal Learning for Multi-Omics: A Survey
Sina Tabakhi, Mohammod Naimul Islam Suvon, Pegah Ahadian, Haiping Lu
2022-12-20
Image and Video Processing · Electrical Eng. & Systems
pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
Alain Jungo, Olivier Scheidegger, Mauricio Reyes, Fabian Balsiger
2021-04-29
Image and Video Processing · Electrical Eng. & Systems
OpenMedIA: Open-Source Medical Image Analysis Toolbox and Benchmark under Heterogeneous AI Computing Platforms
Jia-Xin Zhuang, Xiansong Huang, Yang Yang, Jiancong Chen +5
2022-09-09
Computation and Language · Computer Science
Learning for Biomedical Information Extraction: Methodological Review of Recent Advances
Feifan Liu, Jinying Chen, Abhyuday Jagannatha, Hong Yu
2016-06-28
Information Retrieval · Computer Science
OMICtools: a community-driven search engine for biological data analysis
Helene Perrin, Marion Denorme, Julien Grosjean, OMICtools community +6
2017-07-13
Databases · Computer Science
Conquery: an open source application to analyze high content healthcare data
Fabian Kovacs, Max Thonagel, Marion Ludwig, Alexander Albrecht +6
2022-02-08
Image and Video Processing · Electrical Eng. & Systems
DeepReg: a deep learning toolkit for medical image registration
Yunguan Fu, Nina Montaña Brown, Shaheer U. Saeed, Adrià Casamitjana +13
2020-11-06
Software Engineering · Computer Science
BIOMERO: BioImage analysis in OMERO
Torec T. Luik, Rodrigo Rosas-Bertolini, Eric A. J. Reits, Ron A. Hoebe +1
2024-07-26
Genomics · Quantitative Biology
easyGWAS: An integrated interspecies platform for performing genome-wide association studies
Dominik Grimm, Bastian Greshake, Stefan Kleeberger, Christoph Lippert +4
2012-12-20
Computation and Language · Computer Science
A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI
Alejandro Lozano, Min Woo Sun, James Burgess, Jeffrey J. Nirschl +15
2025-04-03
Medical Physics · Physics
PyTomography: A Python Library for Medical Image Reconstruction
Lucas A. Polson, Roberto Fedrigo, Chenguang Li, Maziar Sabouri +7
2025-01-03
Quantitative Methods · Quantitative Biology
A Platform for the Biomedical Application of Large Language Models
Sebastian Lobentanzer, Shaohong Feng, The BioChatter Consortium, Andreas Maier +5
2024-02-20
Machine Learning · Computer Science
ImDrug: A Benchmark for Deep Imbalanced Learning in AI-aided Drug Discovery
Lanqing Li, Liang Zeng, Ziqi Gao, Shen Yuan +10
2022-10-20
Distributed, Parallel, and Cluster Computing · Computer Science
brainlife.io: A decentralized and open source cloud platform to support neuroscience research
Soichi Hayashi, Bradley A. Caron, Anibal Sólon Heinsfeld, Sophia Vinci-Booher +60
2024-05-28
Machine Learning · Computer Science
Interpretable Deep Learning Methods for Multiview Learning
Hengkang Wang, Han Lu, Ju Sun, Sandra E Safo
2024-02-19
Machine Learning · Computer Science
A Systematic Review of Intermediate Fusion in Multimodal Deep Learning for Biomedical Applications
Valerio Guarrasi, Fatih Aksu, Camillo Maria Caruso, Francesco Di Feola +3
2026-03-13
Software Engineering · Computer Science
ImageJ2: ImageJ for the next generation of scientific image data
Curtis T. Rueden, Johannes Schindelin, Mark C. Hiner, Barry E. DeZonia +3
2017-11-07
Databases · Computer Science
Empowering Investigative Journalism with Graph-based Heterogeneous Data Management
Angelos-Christos Anadiotis, Oana Balalau, Theo Bouganim, Francesco Chimienti +5
2021-02-09
Applied Physics · Physics
AIMBio-Mat: An AI-Native FAIR Platform for Closed-Loop Materials Discovery and Biomedical Translation
D. -M. Mei, K. Acharya, C. M. Adhikari, M. Adhikari +50
2026-05-21
Human-Computer Interaction · Computer Science
Supporting Patients in Managing Electronic Health Records and Biospecimens Consent for Research: Insights from a Mixed-Methods Usability Evaluation of the iAGREE Portal
Di Hu, Xi Lu, Yunan Chen, Michelle Keller +5
2025-11-04
Emerging Technologies · Computer Science
Designing and Evaluating an AI-enhanced Immersive Multidisciplinary Simulation (AIMS) for Interprofessional Education
Ruijie Wang, Jie Lu, Bo Pei, Evonne Jones +2
2026-02-13
Human-Computer Interaction · Computer Science
An architecture of open-source tools to combine textual information extraction, faceted search and information visualisation
Daniel Sonntag, Hans-Jürgen Profitlich
2018-10-31