Hierarchical correction of p-values via an ultrametric tree running Ornstein-Uhlenbeck process
Applications
2021-09-28 v4
Abstract
Statistical testing is classically used as an exploratory tool to search for association between a phenotype and many possible explanatory variables. This approach often leads to multiple testing under dependence. We assume a hierarchical structure between tests via an Ornstein-Uhlenbeck process on a tree. The process correlation structure is used for smoothing the p-values. We design a penalized estimation of the mean of the Ornstein-Uhlenbeck process for p-value computation. The performances of the algorithm are assessed via simulations. Its ability to discover new associations is demonstrated on a metagenomic dataset. The corresponding R package is available from https://github.com/abichat/zazou.
Keywords
Cite
@article{arxiv.2009.13335,
title = {Hierarchical correction of p-values via an ultrametric tree running Ornstein-Uhlenbeck process},
author = {Antoine Bichat and Christophe Ambroise and Mahendra Mariadassou},
journal= {arXiv preprint arXiv:2009.13335},
year = {2021}
}
Comments
22 pages, 6 figures