English

Hierarchical correction of p-values via an ultrametric tree running Ornstein-Uhlenbeck process

Applications 2021-09-28 v4

Abstract

Statistical testing is classically used as an exploratory tool to search for association between a phenotype and many possible explanatory variables. This approach often leads to multiple testing under dependence. We assume a hierarchical structure between tests via an Ornstein-Uhlenbeck process on a tree. The process correlation structure is used for smoothing the p-values. We design a penalized estimation of the mean of the Ornstein-Uhlenbeck process for p-value computation. The performances of the algorithm are assessed via simulations. Its ability to discover new associations is demonstrated on a metagenomic dataset. The corresponding R package is available from https://github.com/abichat/zazou.

Keywords

Cite

@article{arxiv.2009.13335,
  title  = {Hierarchical correction of p-values via an ultrametric tree running Ornstein-Uhlenbeck process},
  author = {Antoine Bichat and Christophe Ambroise and Mahendra Mariadassou},
  journal= {arXiv preprint arXiv:2009.13335},
  year   = {2021}
}

Comments

22 pages, 6 figures