English

Goal-conditioned GFlowNets for Controllable Multi-Objective Molecular Design

Machine Learning 2023-07-03 v2 Biomolecules

Abstract

In recent years, in-silico molecular design has received much attention from the machine learning community. When designing a new compound for pharmaceutical applications, there are usually multiple properties of such molecules that need to be optimised: binding energy to the target, synthesizability, toxicity, EC50, and so on. While previous approaches have employed a scalarization scheme to turn the multi-objective problem into a preference-conditioned single objective, it has been established that this kind of reduction may produce solutions that tend to slide towards the extreme points of the objective space when presented with a problem that exhibits a concave Pareto front. In this work we experiment with an alternative formulation of goal-conditioned molecular generation to obtain a more controllable conditional model that can uniformly explore solutions along the entire Pareto front.

Keywords

Cite

@article{arxiv.2306.04620,
  title  = {Goal-conditioned GFlowNets for Controllable Multi-Objective Molecular Design},
  author = {Julien Roy and Pierre-Luc Bacon and Christopher Pal and Emmanuel Bengio},
  journal= {arXiv preprint arXiv:2306.04620},
  year   = {2023}
}

Comments

14 pages

R2 v1 2026-06-28T10:59:08.863Z