English

Geometric group testing

Computational Geometry 2020-12-03 v4 Data Structures and Algorithms Combinatorics

Abstract

Group testing is concerned with identifying tt defective items in a set of mm items, where each test reports whether a specific subset of items contains at least one defective. In non-adaptive group testing, the subsets to be tested are fixed in advance. By testing multiple items at once, the required number of tests can be made much smaller than mm. In fact, for tO(1)t \in \mathcal{O}(1), the optimal number of (non-adaptive) tests is known to be Θ(logm)\Theta(\log{m}). In this paper, we consider the problem of non-adaptive group testing in a geometric setting, where the items are points in dd-dimensional Euclidean space and the tests are axis-parallel boxes (hyperrectangles). We present upper and lower bounds on the required number of tests under this geometric constraint. In contrast to the general, combinatorial case, the bounds in our geometric setting are polynomial in mm. For instance, our results imply that identifying a defective pair in a set of mm points in the plane always requires Ω(m3/5)\Omega(m^{3/5}) tests, and there exist configurations of mm points for which O(m2/3)\mathcal{O}(m^{2/3}) tests are sufficient, whereas to identify a single defective point in the plane, Θ(m1/2)\Theta(m^{1/2}) tests are always necessary and sometimes sufficient.

Keywords

Cite

@article{arxiv.2004.14632,
  title  = {Geometric group testing},
  author = {Benjamin Aram Berendsohn and László Kozma},
  journal= {arXiv preprint arXiv:2004.14632},
  year   = {2020}
}