English

Genetic robustness of let-7 miRNA sequence-structure pairs

Populations and Evolution 2018-01-17 v1 Combinatorics

Abstract

Genetic robustness, the preservation of evolved phenotypes against genotypic mutations, is one of the central concepts in evolution. In recent years a large body of work has focused on the origins, mechanisms, and consequences of robustness in a wide range of biological systems. In particular, research on ncRNAs studied the ability of sequences to maintain folded structures against single-point mutations. In these studies, the structure is merely a reference. However, recent work revealed evidence that structure itself contributes to the genetic robustness of ncRNAs. We follow this line of thought and consider sequence-structure pairs as the unit of evolution and introduce the spectrum of inverse folding rates (IFR-spectrum) as a measurement of genetic robustness. Our analysis of the miRNA let-7 family captures key features of structure-modulated evolution and facilitates the study of robustness against multiple-point mutations.

Keywords

Cite

@article{arxiv.1801.05056,
  title  = {Genetic robustness of let-7 miRNA sequence-structure pairs},
  author = {Qijun He and Fenix W. Huang and Christopher Barrett and Christian M. Reidys},
  journal= {arXiv preprint arXiv:1801.05056},
  year   = {2018}
}

Comments

9 pages 7 figures