English

Extremely Scalable Distributed Computation of Contour Trees via Pre-Simplification

Computational Geometry 2025-08-13 v1 Distributed, Parallel, and Cluster Computing Data Structures and Algorithms

Abstract

Contour trees offer an abstract representation of the level set topology in scalar fields and are widely used in topological data analysis and visualization. However, applying contour trees to large-scale scientific datasets remains challenging due to scalability limitations. Recent developments in distributed hierarchical contour trees have addressed these challenges by enabling scalable computation across distributed systems. Building on these structures, advanced analytical tasks -- such as volumetric branch decomposition and contour extraction -- have been introduced to facilitate large-scale scientific analysis. Despite these advancements, such analytical tasks substantially increase memory usage, which hampers scalability. In this paper, we propose a pre-simplification strategy to significantly reduce the memory overhead associated with analytical tasks on distributed hierarchical contour trees. We demonstrate enhanced scalability through strong scaling experiments, constructing the largest known contour tree -- comprising over half a trillion nodes with complex topology -- in under 15 minutes on a dataset containing 550 billion elements.

Keywords

Cite

@article{arxiv.2508.08433,
  title  = {Extremely Scalable Distributed Computation of Contour Trees via Pre-Simplification},
  author = {Mingzhe Li and Hamish Carr and Oliver Rübel and Bei Wang and Gunther H. Weber},
  journal= {arXiv preprint arXiv:2508.08433},
  year   = {2025}
}

Comments

To be published at the 15th IEEE Workshop on Large Scale Data Analysis and Visualization (LDAV) 2025

R2 v1 2026-07-01T04:45:11.121Z