English

Extracting Three Dimensional Surface Model of Human Kidney from the Visible Human Data Set using Free Software

Medical Physics 2013-02-20 v1 Computational Engineering, Finance, and Science

Abstract

Three dimensional digital model of a representative human kidney is needed for a surgical simulator that is capable of simulating a laparoscopic surgery involving kidney. Buying a three dimensional computer model of a representative human kidney, or reconstructing a human kidney from an image sequence using commercial software, both involve (sometimes significant amount of) money. In this paper, author has shown that one can obtain a three dimensional surface model of human kidney by making use of images from the Visible Human Data Set and a few free software packages (ImageJ, ITK-SNAP, and MeshLab in particular). Images from the Visible Human Data Set, and the software packages used here, both do not cost anything. Hence, the practice of extracting the geometry of a representative human kidney for free, as illustrated in the present work, could be a free alternative to the use of expensive commercial software or to the purchase of a digital model.

Cite

@article{arxiv.1302.4557,
  title  = {Extracting Three Dimensional Surface Model of Human Kidney from the Visible Human Data Set using Free Software},
  author = {Kirana Kumara P},
  journal= {arXiv preprint arXiv:1302.4557},
  year   = {2013}
}

Comments

14 pages, 8 figures, accepted version

R2 v1 2026-06-21T23:28:35.729Z