English

Extensions of results on phylogeny graphs of degree bounded digraphs

Combinatorics 2024-10-08 v2

Abstract

An acyclic digraph in which every vertex has indegree at most ii and outdegree at most jj is called an (i,j)(i,j) digraph for some positive integers ii and jj. The phylogeny graph of a digraph DD has V(D)V(D) as the vertex set and an edge uvuv if and only if one of the following is true: (u,v)A(D)(u,v) \in A(D); (v,u)A(D)(v,u) \in A(D); (u,w)A(D)(u,w) \in A(D) and (v,w)A(D)(v,w) \in A(D) for some wV(D)w \in V(D). A graph GG is a phylogeny graph (resp.\ an (i,j)(i,j) phylogeny graph) if there is an acyclic digraph DD (resp.\ an (i,j)(i,j) digraph DD) such that the phylogeny graph of DD is isomorphic to GG. Lee~{\em et al.} (2017) and Eoh and Kim (2021) studied the (2,2)(2,2) phylogeny graphs, (1,j)(1,j) phylogeny graphs, (i,1)(i,1) phylogeny graphs, and (2,j)(2,j) phylogeny graphs. Their work was motivated by problems related to evidence propagation in a Bayesian network for which it is useful to know which acyclic digraphs have chordal moral graphs (phylogeny graphs are called moral graphs in Bayesian network theory). In this paper, we extend their work by giving necessary conditions of chordal (i,2)(i,2) phylogeny graphs. We go further to give necessary conditions of (i,j)(i,j) phylogeny graphs by listing forbidden induced subgraphs.

Keywords

Cite

@article{arxiv.2212.05391,
  title  = {Extensions of results on phylogeny graphs of degree bounded digraphs},
  author = {Myungho Choi and Suh-Ryung Kim},
  journal= {arXiv preprint arXiv:2212.05391},
  year   = {2024}
}