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Equilibrium in a Reaction Network of Assemblies

Statistical Mechanics 2026-07-08 v1 Chemical Physics

Abstract

We study a mean-field reaction network whose species are assemblies built from identical atoms by reversible coagulation and fragmentation. Each assembly is an ordered binary tree, so the number of species of a given length grows combinatorially, as the Catalan numbers. The model nonetheless admits an explicit equilibrium and tractable stochastic dynamics. A finite volume VV sets a crossover length lclnVl_c \sim \ln V that splits the equilibrium into two sectors. Below lcl_c each assembly occurs in many copies and the rank-frequency distribution is Zipf-like; above lcl_c individual species are rare and fluctuation-dominated. The statistical weight of the rare sector decays slowly with volume, controlling the finite-size scaling of diversity, Shannon entropy, and other assembly-weighted observables. The equilibrium also admits a transparent grand-canonical description in terms of a bond energy and an atomic chemical potential. Together these results make the model a controlled neutral baseline against which selection and driving in richer assembly networks can be measured.

Cite

@article{arxiv.2607.07959,
  title  = {Equilibrium in a Reaction Network of Assemblies},
  author = {Giampaolo Folena and Germán Kruszewski},
  journal= {arXiv preprint arXiv:2607.07959},
  year   = {2026}
}

Comments

38 pages, 11 figures