Training deep graph neural networks (GNNs) poses a challenging task, as the performance of GNNs may suffer from the number of hidden message-passing layers. The literature has focused on the proposals of {over-smoothing} and {under-reaching} to explain the performance deterioration of deep GNNs. In this paper, we propose a new explanation for such deteriorated performance phenomenon, {mis-simplification}, that is, mistakenly simplifying graphs by preventing self-loops and forcing edges to be unweighted. We show that such simplifying can reduce the potential of message-passing layers to capture the structural information of graphs. In view of this, we propose a new framework, edge enhanced graph neural network (EEGNN). EEGNN uses the structural information extracted from the proposed Dirichlet mixture Poisson graph model (DMPGM), a Bayesian nonparametric model for graphs, to improve the performance of various deep message-passing GNNs. We propose a Markov chain Monte Carlo inference framework for DMPGM. Experiments over different datasets show that our method achieves considerable performance increase compared to baselines.
@article{arxiv.2208.06322,
title = {EEGNN: Edge Enhanced Graph Neural Network with a Bayesian Nonparametric Graph Model},
author = {Yirui Liu and Xinghao Qiao and Liying Wang and Jessica Lam},
journal= {arXiv preprint arXiv:2208.06322},
year = {2023}
}