In fully sampled cardiac MR (CMR) acquisitions, motion can lead to corruption of k-space lines, which can result in artefacts in the reconstructed images. In this paper, we propose a method to automatically detect and correct motion-related artefacts in CMR acquisitions during reconstruction from k-space data. Our correction method is inspired by work on undersampled CMR reconstruction, and uses deep learning to optimize a data-consistency term for under-sampled k-space reconstruction. Our main methodological contribution is the addition of a detection network to classify motion-corrupted k-space lines to convert the problem of artefact correction to a problem of reconstruction using the data consistency term. We train our network to automatically correct for motion-related artefacts using synthetically corrupted cine CMR k-space data as well as uncorrupted CMR images. Using a test set of 50 2D+time cine CMR datasets from the UK Biobank, we achieve good image quality in the presence of synthetic motion artefacts. We quantitatively compare our method with a variety of techniques for recovering good image quality and showcase better performance compared to state of the art denoising techniques with a PSNR of 37.1. Moreover, we show that our method preserves the quality of uncorrupted images and therefore can be also utilized as a general image reconstruction algorithm.
@article{arxiv.1906.05695,
title = {Detection and Correction of Cardiac MR Motion Artefacts during Reconstruction from K-space},
author = {lkay Oksuz and James Clough and Bram Ruijsink and Esther Puyol-Anton and Aurelien Bustin and Gastao Cruz and Claudia Prieto and Daniel Rueckert and Andrew P. King and Julia A. Schnabel},
journal= {arXiv preprint arXiv:1906.05695},
year = {2019}
}
Comments
Accepted to MICCAI 2019. arXiv admin note: text overlap with arXiv:1808.05130